| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_49739 |
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| Symbol | |
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| ID | 7198431 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011692 |
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| Strand | + |
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| Start bp | 116878 |
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| End bp | 122452 |
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| Gene Length | 5575 bp |
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| Protein Length | 1813 aa |
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| Translation table | |
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| GC content | 48% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002184489 |
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| Protein GI | 219128584 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.928203 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GGAACGCTCG TCATATCAAG CCTCATTGAC TTCGACGTGC GCACCCGAGG TGTCGAGAAA
GAGCCTCTAC GTCGCGCACG GCTTACACAA TGAATTTTGT ACAGCAACTG GAGGAATGCC
TTCGGGATTT GGCGTCCGAA GCTCGAAAGA ATCATCCGGG TGTGAAGGAA GCTTCCGAAC
GGGCGACGCT GAAGTTGCGG CACCTCAAAA CCAGCTACGT TGCGGCAGTA CGGCAAGCCG
GAAACGAGGG TACCGAACAC CCAACAACTA GTTTGTTTCA GTCCTCCGAT ATGTTGCATC
CCTTTCTACT GGCAGCGAAT TATCCCAACG CCTCAAGTCG TTTGTTGGAC GTATCGTTTC
GGGCGATCCG CTTGTTAATG GAAGCCGATG CGGTAGTGCC GACTGACGGA ATTCATTTGG
TACGCGTGTG GATGATTCAG GCACAAGTTG GAGTTTCCTA TTTTCAAAAG GTTTACGCTA
AAGAGATTAA GTCGGCGGAA GACCAGCAAG CAGCTGCTAC AGAGGCGGAG GCACCGAAAC
CCCTGAATGC TCCAGCTGCC AGCAACAGCG GAGGTGGGTG GTTTTCTTGG GCAACAAGTT
CCTCTACTTC CGTGCCGCCC TCCTCAGTAA GCTCAAACGA TTCAATGAAT ATTAGCAGTA
GACCAATCAA GAACGCAGTA AGCAGTTCGA GCGGACAGTC TGGGCAGTCT TCTCAATCTC
CCAAGGATAT GGAAAAGCGT GCTTTAGAAA TTCTGTCCAG TTTGTTGCAG TTGTTGGAGG
GTCTGAGGAG ACACCCGGAA GTATCGAACG CCGAACTATG GAGCAACGCT GTAGCGTTAG
GTTGTGTGTG GCTGCACTAT TTACCAAGTC GACACACCGT TCACCAAGCT GCCCACTCTA
CTGTCGCCCA AATTCTTAGT CTTTTTCTGG AAACGGAGAA AGATCCTGAT CTATGGGCTC
TGACTTGGGA CGATCTTTTG GTGCTAGCAA CGGGAAATAT ACCCAAAAAA GGACTGCAAG
GGGCATTTTC TCTTTGTCGT CCGGCAGGAC CCACCAATTC CACCGCTGCC GTTCCTCCGT
CACCTGAGTT TGCCTTGGAG CTCTTAGCCC TGTTGTCCAA AGATCATCAT TTTCCAGAAA
AGATCATACC TAAGATGATG CAAATGAGTA TGATGCTGCT TCAGCGCGTT GCCAGGATGT
CGGTGGAGAA GTACATGCGA ACTGTACAAT GGACTACTGT CGTCCTGGTC TCTCAGGTTC
GAAAGTACCC GAACGAGTGC GGCGAACTTT TCGTGGCGCT TCTCAAAGCC ATTTCACTCG
CTACAGAGGC ATGTCGCAGT CATCACGATT TTGAGGATGG CTATTTTTAC AGTCAAGATG
AAGCGCTGTT ACATCCATTG CCAGTGTCGG AGTTGCCTTC CAGCGCCAAA GAATCTACCC
GTCGGAGAGG TCTCACGACG CATATTCTAG TGTCATTCTT TCCTTCGAAT GCACTCTGGA
AAGCCAGTTT TGCTCTCGAG GCAGTTTACA GTATGTTAGA CAAAGACGTG ACAAGGATTT
TTTTCAACGA TACATCGACT TTGTCAACAC TTGTAGAAGC GTTCAGTGAT TTCGCCACAA
TTGGGACCAG CTGTCAAGAC CACATGCATC AACTTGTCGA GTTTTGTCAG AAGGAACGAC
GAAGCATCAG CTCTCTTCAG CCAACCATCT TTCGCAAGGC CGAGCAAGTC TTGGTGCTCG
GAAATGCTTC GATTGCTTTC GGGGAGGATA CGGGAAGCAG AGCCTCTGAG AAATACGGGG
TACTCTCCAA GCCATCTCCC ATCCTCGGGG AGTCGTTGTG GATTTCGTTG CAGACTGTTT
TGCAAATAAG TGAGGGGTTA AAAGGATTAG ACAACCAAGC AGCTTTGCTG GAAGAATCTT
TCGCGTCAAC GCTAGCAGTC CTCCAACACT ACCTGAAACG ATTTTCAGGT TCCGCGGAAA
TCATCGGGCT CGCTCTGCTT GGATACTCAA GTCTAGCTGA CGTTTGCTTT CCTCTCGAAG
ATACTTCCAT GCAGCGTAAA GCTATGTTGA CGTCACTCTG CAAGTTGTCG CTTCCGGCTT
GGGGAAAGCA CGACGCTTCG CTTCAACTTC AAGATCATCA CATCCGCTCA CTGTTGTGTC
TATTTCGTAT TTTGCACCGA CACCACGATT ATGTCGCGCT GGAGTGGGAG ATTATTCTTT
GGACATTTGA AGAACTGTCC GTTCTCGTAG TCGCATCGCC AACTTTATCA GAGGAGGCGT
ATCACGGAGC CTTGGCAGTC TCAGCTGTTT TTGGGCGACT AGCAGCTTTC TCTACGTGTT
TGTCAGAAAA GTCAATAATA CGAATGACAG AAAGTTTGAC CGAAATAGTC CAATCCATTA
TGGAAAAGCG TGACCTACTC AAAGACTCTG ATATTCTACT ACCTGAGCGA ACGACAACGA
GTGATGCTGT TGACAAGGTA CCACCCGACG GAAGCGAGAC CATAAGTGGT AAGATTGTTG
GCATTGGGGT TCGTGCAATC TACGGTGCTT CGTTCAACGA AGCGGAAAAT GTACAAAACG
ATCCTTTGCC GTTCGTGGAG CGAACAAAGA GCACATTTAA CGAGGAATAC CGACGCACAT
TTATTGACAG ACTGACCGGT GCCAAAAGCT CGCTCCAGAT AGCTGCTATC GGTCGGTTGC
CCTTCGCACT CACACTTTTG GCTGATGTCG CTATGGCCAA CGCTTTTCGC TATAAGCAGT
GCGGGGAGGC TATCTCCAAT CTTCTGTTTG AGCTTGCTGC ATCATCCCCC CCTGTCCGGT
CCTTCGTCAT GGAGACTTTA GTTGTATTAA CTGTGGCGCA CATTGGCAAT GGTAGTGGAT
CGTCATCTCA GCTCATTGGA TCTGGAAAGT TGGTAGTAGA AGACCCCATG CAAAGCCAGC
TATTGGCAGT AGAGCACTCT GATGTGACCC CGGATCAGAC TCTTGCAATG CAAGAACTTT
CGCACGTGAA AATACTTTCG CCCCTCTGTA GCTCAATATG CAGTACGAAG AATGCTGAAA
TGGCCGAAGC CTCCCTTGTA ACGTTAACGT CGATTCTCGA GAGTACAGGT CACACGCTGC
ACGGAGAAGT CTGGATTCTC ATCATCGATA CAGTTTCGTC CTTGTCCGGC GATCCAGCAC
AAAAACCATA CCGCTCGTCG TCTGAATGGT CAAAATGCTG CTTGCGTGCG TTTCGTTGCT
TGAAATTGAT CACCGACGAC TTTTCGGAGG AGGTACAAGA AATCGCCGAG TCTTGCGAAA
CAACGAGAAC ACCACTACTC GATTGCTGCT CTGCCTTTGG TAGTTCACGA CATGATATCA
ACACTTCACT AACTTCCATA GGTCTTCTTT GGTCGATTGT AGACCAAGAT TCGGGTCCGC
GATCTCTGGA CAATGCTCTG TCTAAGTTGG CGAATCTCGC TGCCGACGAT CGACCGGAAG
TCAGAAATGC AGCAATTAAC ACATTGTTCT CCTGCATTGT TGGACGGGGC CAAACGTTCA
CAGTATCTCA ATGGGAATTT TGTTTTTCTC ATACATTATT CCCTGTGTAT GAGCTCGTCC
TATCGAAAAC AGTCGTCGAG GACAACCGTC ATTCAGGTGA TAGTCAGGAT GCATCATCTC
GGTATCTTGT TTCTTTTCAC CACTCACGTG ATTCGACGAG TAAGCAATGG GTAACAACAC
AAGTGGTTGT GTTGAGAGGA CTGATTCGCG TTCTCGGAAA GTTTTTCGTA ATTCTTTTGG
AAACAACCGA CTTATTTATT ACAAAAACTG ACGACCCCCC ATGGTTTCAG GACGTGTGGG
TCCACGTCCT CGATTTTGCG TTCGAAGCCG CAGGTCAGAA TGGGGGGAGG GATACTTTTG
AACTCTGCTC CGCCGGAATT GAGCTTCTCG TCGCCTGTAG CCAAGTTTCA AGCAAGGCAG
GTATCCAAGC AGCACTTGCG CCAGCGACGG TGAGCACAAA TATGGAGGTA GTAAACGGGG
CTTTGCGCAA TGTCCGAGAT CCCACGCCAA GAAATAGTCC CAATGGCCAG CGATCACGCA
CGGTGGCTGT GGAATCTACC CGCGAGGCTC TATTTTTGGA AGCGATTGAA GGCCTGCACT
CGTACCAGGA CTTTCTGGAC TCAAATGACA AAATTGACGA AACTTCGTTG CAACTTATTC
ACAAATTTTG CAGCGGTCTC AGCAAGCTAT ACGAATGCTG TCGAAACGAT GAATTAGCTG
TGTGCAAGCA AGGACTTGAA CCGGTGATCG ATGATACGCT GATACAACGC TTTGTAAACA
TGGTAGCAAC ATGTATAAGA GTTGCTACAA CTGATCCAAG GGCTCGTTTT CTCAATCAGG
CACAACGGTG TGCTCTTGAG TTGCTAGAAA CAATTGCTCT CAATGGATCT TTCGGTGCAT
TCCAGCTCCT CGTTACTCTG GCCGGTTTCT CATTGTTCAT TCGTAAAGAT GCAGACTCTG
ATAGCGGTGA AACGGCTGCC GTGGAAAGCG GAGACATTTT TCTCGACCAG GTAGGCTTTG
AAAGCTCCGT TGTGCTTTCC AAGGCTGTTC TGCAAAATCG CGTTCCACTT CGATGCAAAA
TTTCTGTTTT GAATGAGGTC CTCACAATGT TTCTGACTAA AAGTGCTTCA GCAAAAGCGC
ATCATAGAAA GGCTTACTAC AAACGCATGA TACCAATTTT GGAAGAAGGG CTTCAGGCTG
TAGCTTCAGA AAGAAGATTA AAAGCAGTCG ACGACAACGC TGACGCTCAA TACTTGGATA
CGCTGTGGAC AAAGGTCTTC CAATGCGTGA CTGTAATGCT TACTCCCATT CCGATTGGTA
AAGACATGCT AAAGATACCC CGGGTTTCTG AAGTGCTGGA AGTAATCGAG GCTGTCACAA
AAAACAAAGA TGATACTCAA GATACAAGAC TATGTCGAAT TCTTTCTCAG GGTGGATCCA
ATGCATACGA AGTCGCTCTT TCCCTCGATG AATTTGCTTC GATAGCTGAA TCAGACGCAA
GCCGAAAGTC GAAAAAGCAC AAGGACGAAG TGATGAAGCT ATTTACTGCG TGTTACTTAA
AGGCCTGTAG CCTCAACCCT ATTGACCGTG CCATCATTTC TTTGACCGAC CGCATTCTCA
GCTTTCCTTC CGTCAGTTAT GAAGAGGAGC GCTTGCCAGA AGCAAGAAAA GAAGCCTTGC
TATGTATATG CTCTACAATG AAAGACACCT ATGGAATGGA ATTTTTGGTA GTTGCGGTCT
TTTCGAGCTT GTGCAAATGG CTGCAGTCGT CGATTCAAGA AGTGCGCGAT GCAGTTGCTG
GTGTCTTCGC CGTTGTGAAC GTGTCGGAAA TACTACAGAG TGCTATTGAG CGTTGCAAGG
AGATCGAAGG ACGAGCAGTA GACGCCGAAA AGCAAATAGA AATCCTAGCA TCAACGGTAA
ATAGACTGCA ATCCGCCAAC GAGGAGTTGC AGAGAGAGGT GGCTATACTA CAGGCAAGCT
CAGCATTGTG ATCGCACTAA GTGTAAATGT TTCTATAGAA AAAGATACAG CGACC
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| Protein sequence | MNFVQQLEEC LRDLASEARK NHPGVKEASE RATLKLRHLK TSYVAAVRQA GNEGTEHPTT
SLFQSSDMLH PFLLAANYPN ASSRLLDVSF RAIRLLMEAD AVVPTDGIHL VRVWMIQAQV
GVSYFQKVYA KEIKSAEDQQ AAATEAEAPK PLNAPAASNS GGGWFSWATS SSTSVPPSSV
SSNDSMNISS RPIKNAVSSS SGQSGQSSQS PKDMEKRALE ILSSLLQLLE GLRRHPEVSN
AELWSNAVAL GCVWLHYLPS RHTVHQAAHS TVAQILSLFL ETEKDPDLWA LTWDDLLVLA
TGNIPKKGLQ GAFSLCRPAG PTNSTAAVPP SPEFALELLA LLSKDHHFPE KIIPKMMQMS
MMLLQRVARM SVEKYMRTVQ WTTVVLVSQV RKYPNECGEL FVALLKAISL ATEACRSHHD
FEDGYFYSQD EALLHPLPVS ELPSSAKEST RRRGLTTHIL VSFFPSNALW KASFALEAVY
SMLDKDVTRI FFNDTSTLST LVEAFSDFAT IGTSCQDHMH QLVEFCQKER RSISSLQPTI
FRKAEQVLVL GNASIAFGED TGSRASEKYG VLSKPSPILG ESLWISLQTV LQISEGLKGL
DNQAALLEES FASTLAVLQH YLKRFSGSAE IIGLALLGYS SLADVCFPLE DTSMQRKAML
TSLCKLSLPA WGKHDASLQL QDHHIRSLLC LFRILHRHHD YVALEWEIIL WTFEELSVLV
VASPTLSEEA YHGALAVSAV FGRLAAFSTC LSEKSIIRMT ESLTEIVQSI MEKRDLLKDS
DILLPERTTT SDAVDKVPPD GSETISGKIV GIGVRAIYGA SFNEAENVQN DPLPFVERTK
STFNEEYRRT FIDRLTGAKS SLQIAAIGRL PFALTLLADV AMANAFRYKQ CGEAISNLLF
ELAASSPPVR SFVMETLVVL TVAHIGNGSG SSSQLIGSGK LVVEDPMQSQ LLAVEHSDVT
PDQTLAMQEL SHVKILSPLC SSICSTKNAE MAEASLVTLT SILESTGHTL HGEVWILIID
TVSSLSGDPA QKPYRSSSEW SKCCLRAFRC LKLITDDFSE EVQEIAESCE TTRTPLLDCC
SAFGSSRHDI NTSLTSIGLL WSIVDQDSGP RSLDNALSKL ANLAADDRPE VRNAAINTLF
SCIVGRGQTF TVSQWEFCFS HTLFPVYELV LSKTVVEDNR HSGDSQDASS RYLVSFHHSR
DSTSKQWVTT QVVVLRGLIR VLGKFFVILL ETTDLFITKT DDPPWFQDVW VHVLDFAFEA
AGQNGGRDTF ELCSAGIELL VACSQVSSKA GIQAALAPAT VSTNMEVVNG ALRNVRDPTP
RNSPNGQRSR TVAVESTREA LFLEAIEGLH SYQDFLDSND KIDETSLQLI HKFCSGLSKL
YECCRNDELA VCKQGLEPVI DDTLIQRFVN MVATCIRVAT TDPRARFLNQ AQRCALELLE
TIALNGSFGA FQLLVTLAGF SLFIRKDADS DSGETAAVES GDIFLDQVGF ESSVVLSKAV
LQNRVPLRCK ISVLNEVLTM FLTKSASAKA HHRKAYYKRM IPILEEGLQA VASERRLKAV
DDNADAQYLD TLWTKVFQCV TVMLTPIPIG KDMLKIPRVS EVLEVIEAVT KNKDDTQDTR
LCRILSQGGS NAYEVALSLD EFASIAESDA SRKSKKHKDE VMKLFTACYL KACSLNPIDR
AIISLTDRIL SFPSVSYEEE RLPEARKEAL LCICSTMKDT YGMEFLVVAV FSSLCKWLQS
SIQEVRDAVA GVFAVVNVSE ILQSAIERCK EIEGRAVDAE KQIEILASTV NRLQSANEEL
QREVAILQAS SAL
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