Gene PHATRDRAFT_49730 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_49730 
Symbol 
ID7198407 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011692 
Strand
Start bp83996 
End bp84889 
Gene Length894 bp 
Protein Length282 aa 
Translation table 
GC content51% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002184566 
Protein GI219128745 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATCCTCCTCC ACAGTCAGAC CCTTACCATA CTAGCAACCA GCCGAATGAA TAGGGAGGAA 
ACTCTTTCCA CCTGCGAGTC AGGTCTCACG ACCAGCTCGG TCGGTGATGT TGGAGAAGCT
CTCACCAACA CTGCTGCTGG TAGTAGTGGT ACCACTCCTT TGAGTAGTCC TTTCCGTTCC
TCACGCGAGG TTCGATTCGG AGACCACCGA CCACCAGTCC ACAACAAGCA TCCGTTGACC
ATTTTTATCC GGCACAATAT TGTCCCGGGC AAAGAAGCGC TGTTTGAAGA ATGGGTGATG
GAGATTGGAC GGCTGCTCCG GCGTTTTACA GGTTTTTTGG ACGCCGAAAT CATTCGGCCG
AACTGCTGCG AGTCGCACGA GTACGTTTCG GTGGTGCGTT TCGATACGTA CGACAATTTG
CAGGTATGGA TGGATTCGAG TGAGCGGCAG CTGCATATTG ACAAGGCGTA CGCGTTTTCG
GAAGAACCCA TGAAGGTTTC GTATCACTCG CTGGAATACT GGTTTCACGT ATCCGACGGT
AACAAGAACG GAGGAGGACC ACCGCCACGA GCCAAAATGG CAGTTGTGAC GTTTCTCGTG
ATTTGGTTGC AATCGCGGTA TCTAACCCAG AACACCATCA TGCGCTGGCA TAGCTTGTCT
CCAACCGGCA AGCAAGCCCT ATCCGTCATG TTGATTGTCT TGATGACCAC ATACGTGATC
ATGCCGGTTG TAACCAAGTA TGTTTTAAAT TGGTGGCTCT TTCCGAGAGA GGACCAGCCG
ACTTGGGTTC AGCTTTTGAA CTGTTCTTGG CGAGTAGCCC GGGTAAAGAA GGAAACCAAA
ACATCGAAAC AAGCCCAGAC TTTACCATCT ACGGATGCGG CAGAGTCGGC ATAG
 
Protein sequence
MNREETLSTC ESGLTTSSVG DVGEALTNTA AGSSGTTPLS SPFRSSREVR FGDHRPPVHN 
KHPLTIFIRH NIVPGKEALF EEWVMEIGRL LRRFTGFLDA EIIRPNCCES HEYVSVVRFD
TYDNLQVWMD SSERQLHIDK AYAFSEEPMK VSYHSLEYWF HVSDGNKNGG GPPPRAKMAV
VTFLVIWLQS RYLTQNTIMR WHSLSPTGKQ ALSVMLIVLM TTYVIMPVVT KYVLNWWLFP
REDQPTWVQL LNCSWRVARV KKETKTSKQA QTLPSTDAAE SA