| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_49728 |
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| Symbol | |
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| ID | 7198421 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011692 |
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| Strand | - |
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| Start bp | 79866 |
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| End bp | 81516 |
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| Gene Length | 1651 bp |
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| Protein Length | 381 aa |
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| Translation table | |
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| GC content | 50% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002184564 |
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| Protein GI | 219128741 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.852894 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ACGTCTCGGG TCGGTTTCCA GTGGGCTTCC AACGGCGCAA TATTTTGGGT CAACGCCATA
TTCTAACATA CTCAATCAAA TACATAGACG ACCTGACGAA CCAGAATAGG TACGAGCAAG
GTTACGGTAG AGCCAATCCA AAAGATTGCT GATGCGGACA GAACATCGCA TAGATCGCCA
CTGACCCGGG TGGTCCGCCG GCTCTCCATT GAACTGATGT TGTTCTTCTT GCTTTTCATC
CCACGTGCTC ACGGTTTCAC TCCTTCTCAC TAGCAAAGAA GGAAAGCAAT GATAGACCCC
ACATTTCCTT TTCCTTCATA TCCGAGGGCG CTGCCAACGA AAAGGGACGC ACCTGTACTG
ACATTAGCCG ACAGCAGTGA TTTTCTGTCG GTGGGACCAA TCGTCCCCTT TCATGAGTAT
TTGCCGCAAA AGACGCGACA GTTTGCGGTA ACGTGGCCCA ATCAGACAAC GATTCGGCAT
CCAAAAGTCA GTATGCCATT GAATTTGGGA GAAAAATTAC TGGGTGACTT CTTGGTGGCC
ATTGGTGTAA CGGCTTGTGT GTCTCCTTTT CTTACCATTA TCGACAAAGC TATGGTGCAA
CGATCGGCAA ATTCGCATAC GCTGCTACAA AGTGCAACGG AGAGTGCCAC AGCCATGAGT
AGACACCCCT TCGCCTTTGT AAAGAGTCCT ACTTTTTTAT GGATGTGGAT GACGTACGCT
TCCACGTATA CAGCGGTCAA CATGATCCGC ACGTTGACCG AACACCAAGA CTACCAATTC
GTCCGAGACC ACTATCGTAA CAATTCCGAC GCAATCTCTT CAGCAGCACC GGCAAAGCCA
AACACGAACA CGGTTGTCTT TCTGGGAACT ACCGCCGTCA ATACATCGGC GTCGTTGATC
CGTGATCGAG CGTACGCTAA AATGTTTGGC AATGCGGCGG CGACCAGCGT CCCGCGCGTC
TCGTATGGAC TCTGGATGGC ACGGGATTTC ACCGTAATCG GCTCTAGTTT CGTGCTACCT
GAGTATGTGG CAAGTTTTCT CCAGCATCGA AGCAACCTCA ATGAAGCCGA CGCCCTCAAT
GTTGCACAGT TAGCGACACC GTTGGCGGCA CAAGCCATAG CGGCGCCGTT GCATTTCGTC
GGCCTCGACT GCTACAATCG CGCTTTATCG CATCTCCCTG TTGTTCCACG CCTTGTGGAA
CGTGGCCGAT TCCTTGCGAA AGGATTTGTC GAGGTCACGG CTGCCAAGAT GATTCGAATC
TTGCCCGGAT ACGGGATTGC CGGTGTGTAC AATCGGCAGT TTCGAAATCA ATGGCGTGAC
AACTTGATAC GCCGCCAGAT CATCAAAAAT ACTGCCAACA GGCAGACCTC GTCGATCTCA
CAAGATGGTG TGCGAAACTT GGTTGCTCTG ATTCGGAGCA AGTCGTCCAC GTAGACAGTT
CTGCCAAACG CTCTTCCAAA AACCCGACTG ATACACTACT ACGACCCAAT CCGATTTACT
GGCCGATCCA AACTCATTAC TAATAAAAGA CCGAATCGAT AGAGTGCCGT ATTTGAAGAC
ACGCATAACA CGAAAGCAGG TTTCAGACTC ATAGAAACAA AGTCGCAATC CGATTTATTA
GAAAACCCTA ATTTTAGAAA GAAACCACTA T
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| Protein sequence | MIDPTFPFPS YPRALPTKRD APVLTLADSS DFLSVGPIVP FHEYLPQKTR QFAVTWPNQT
TIRHPKVSMP LNLGEKLLGD FLVAIGVTAC VSPFLTIIDK AMVQRSANSH TLLQSATESA
TAMSRHPFAF VKSPTFLWMW MTYASTYTAV NMIRTLTEHQ DYQFVRDHYR NNSDAISSAA
PAKPNTNTVV FLGTTAVNTS ASLIRDRAYA KMFGNAAATS VPRVSYGLWM ARDFTVIGSS
FVLPEYVASF LQHRSNLNEA DALNVAQLAT PLAAQAIAAP LHFVGLDCYN RALSHLPVVP
RLVERGRFLA KGFVEVTAAK MIRILPGYGI AGVYNRQFRN QWRDNLIRRQ IIKNTANRQT
SSISQDGVRN LVALIRSKSS T
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