Gene PHATRDRAFT_49723 details

Gene Information

• Locus tag: PHATRDRAFT_49723
• ID: 7198404
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011692
• Strand: +
• Start bp: 66437
• End bp: 68565
• Gene Length: 2129 bp
• Protein Length: 658 aa
• GC content: 51%
• Product: predicted protein
• Protein accession: XP_002184481
• Protein GI: 219128567

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.382168
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCAAACT TCGGTGACGT CGGCATGTTG ATGCCGAATC GTCCTCCAAC AACCGATATG 
AGAACGAGAA CACCTTGTGA GTGGCAGCCG GTGCTGGACT GCACCCACCG GCCATCTGTG 
GACGACCCCA AAAATATGGC TTCCCTCATT GGAGGACTGT CTGTGCTGCG CAGGTCTGGT 
CCCACTACCT TGAAATTCGA ATCTAGCTCT AGCTTGAATT TTGAACAATA ATAGTTCGAA 
AGTTTTGTGC GCCGTGGTCC TGTGGACCGT GCACCACCGG GAATCACTGT CCGCATCCAC 
GTGGAAGAAT CGAGAAACAC GAAAACGTCG TGTGGTGTTT TGGTGCGTGA CGGTGAGAGT 
GCGCACAGTG TGGCGTTCGG GTCTCCGATG GATGAAACCC GTACACCCCA ACAAGAAGGA 
CAACGTAGTA AGCCAAACTC GTGACAAGCT CCCGTACGCT CATGCCCATT CCAAGCAATA 
CCAAACATGC CTACGTCGTT TACAATGAAC CCCGCACGGA GTCGACATGG ACAGCTGCAC 
CGTTCTAGCG TGAGAAAAGC GCTTCTTCCG TTGCTGGTGT CGATGGTGCA CGCGGGTCGA 
TTGCCGTTGG GAATTCTCCT TTCGTCGCCG TCGGCTTTTT CGGAAATAAG AACGAATAGT 
GAATCAGCGT TAGGCACAGT ACGGCACCAG TTACACAACG AAGCCTTTGG TGGGTCCGGA 
GACCAAACGC GGTTCAGATA TCCGGGTCGA AAAGGACCGC TTTGCGCTGT CACCAAGTTG 
CGAGGAGGTG ATGTTTCCGA CGGGGAAGAC GAATCTTACG ACAGTGACGG GGAAGATACC 
AATGATTCGG ATGAAGAGGA GGAAGCTGAG ATTGCCGCGG TACCGGAGTC TCGAGATCCA 
CAAAGCGAAC CAGAAGACGA ATCCGAGGCC CATCCTTTAT CTTCGGTCAT TTCTATGGAA 
CCGGTACCAA TCACCATCAA AACATCGTTA GGTACCAAGG CTCTAGACCA CATAGTAGAG 
CTGACGGTAC ATCGCTCGAG GAATATTGCT TCGCTTAAAC TGAGTGCTAG TCGCCAGCTA 
CCAGGACGGC CACCAGTTTC TGTGATGCAC ATGTTGCTCA ACGGAAAAGT ATTGAGTGAC 
GAAATGCTAC TGGACGAGTT GATTGATGAC GACGACGAGA AAGACGATAC CGACGGTACT 
GGTAGTGAAA GCCAGCTCAC TTTAACGTTG GATATGCTAC CACCTGTCGA TCCCAAATTT 
GTCGGCCAAC TAGAGTCACA AATGAAGGAT ATGACCACCG CAGAGCTGTT GGGAACATTC 
GCTGCCAATG AGGCTGCATT GTACCAGAAC GCGGCACTCT TGCTTGCCGA GCAAATGGAG 
CCAGTATACG ACGATGATCA AGTGGAGGTA GGCATTTCCG AGGTGGCGAC ACACCCACCG 
CCGCTCGTGA ACGTGCAAGT TCGCGAGCAA GCAGCACGCA TCCGTCGAGA CTTGGAAAGT 
AAAATCTTGG CTTCGGAGCA CTCGCAAAAG ATTCTCGCTG ACCCTTTGCC CCCTTCCGCC 
AAACTAGCAG ATCTACAACG TGTCGAGCGT CGTGGCCAAC GGGTTCGACG AGTCGCGGGA 
TCGGGTGGCG TAACGACCGG CTTGAAACGA TCGATTCAAA AAAATCTGAA CGTACACTGG 
GGTGACGCTA TACGGAATTT TTGTCTCTTT TTGTTCTTTG GATACTTTGG TGGGCGTACA 
CCCGTAAGTC GGGCTATTCT GTTGCTGGGT GCACCAAGCG TCTTTGTGCT ACAGGCACGG 
CCCGTCAAAC TGTGGATCAA ATGTCTCATG TACGCAATGC TCGACCATCC GCCTGGAATT 
TTCTTGAGTT TGCTGCCCGC CCCCCAACAG GCCATTTTGA GTCTGAATGT GGGCGAGGAA 
ATGAAAACTA TTTATGGTAA TACACTGACC AACACGGTGG TGAACGAGGT TGATGCAGAG 
CCGGAAGAAC TGGCAGACCT GTACGAAATG ACCGACGTAA TAATTGACGG CGAAGATGAT 
GACGAGTTCT ATGCTGTCGA CGAATACGAA AGTAGCTATG ATGATGACGA CGAGTAATTA 
TGTATACTAA TTGCTGTTTC GAAATCGCT 

 

Protein sequence

MSNFGDVGML MPNRPPTTDM RTRTPCEWQP VLDCTHRPSV DDPKNMASLI GGLSFESFVR 
RGPVDRAPPG ITVRIHVEES RNTKTSCGVL VRDGESAHSV AFGSPMDETR TPQQEGQRTI 
PNMPTSFTMN PARSRHGQLH RSSVRKALLP LLVSMVHAGR LPLGILLSSP SAFSEIRTNS 
ESALGTVRHQ LHNEAFGGSG DQTRFRYPGR KGPLCAVTKL RGGDVSDGED ESYDSDGEDT 
NDSDEEEEAE IAAVPESRDP QSEPEDESEA HPLSSVISME PVPITIKTSL GTKALDHIVE 
LTVHRSRNIA SLKLSASRQL PGRPPVSVMH MLLNGKVLSD EMLLDELIDD DDEKDDTDGT 
GSESQLTLTL DMLPPVDPKF VGQLESQMKD MTTAELLGTF AANEAALYQN AALLLAEQME 
PVYDDDQVEV GISEVATHPP PLVNVQVREQ AARIRRDLES KILASEHSQK ILADPLPPSA 
KLADLQRVER RGQRVRRVAG SGGVTTGLKR SIQKNLNVHW GDAIRNFCLF LFFGYFGGRT 
PVSRAILLLG APSVFVLQAR PVKLWIKCLM YAMLDHPPGI FLSLLPAPQQ AILSLNVGEE 
MKTIYGNTLT NTVVNEVDAE PEELADLYEM TDVIIDGEDD DEFYAVDEYE SSYDDDDE