Gene PHATRDRAFT_49717 details

Gene Information

• Locus tag: PHATRDRAFT_49717
• ID: 7198400
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011692
• Strand: -
• Start bp: 44304
• End bp: 46579
• Gene Length: 2276 bp
• Protein Length: 421 aa
• GC content: 52%
• Product: predicted protein
• Protein accession: XP_002184559
• Protein GI: 219128730

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CGACTGTGAT ACACAGGCAG CCATAGAGTT TAACCTCTTG GTGTCTGTCC AGTATTTGGT 
TGCTTTTACC TGCGTACAAT GGGAGCGGCA TCGTCGTTTC TGTGCACCCA GGCCGACGCC 
ATTCCGGGTC AGCTCATTGC CGGTACATTG CCTGCCGTCC GCCACTGCAT CGTGTACGGC 
AAGGAGGACG GCACATTGCG CGAAGAAACG CAACAGCTAC CCACAGTTAC CGACCAATCG 
GATCACGTCT GGGTGCGTGT CCACGCCGTT GGACTTAATC CGGTTGACGC TAAGAACGTC 
GTCGGCGACA AGTTTCCTCA CCACTGGCGC ATTGTGCGTT CCTGGGTCCG TTCCGCCTTG 
GTCGCCGGCA CCATTCCTGG ATTTGATTAC GCTGGTACCG TTGCGGCCCT ACCGAAGCAC 
GGACGGGCCC TCAAGTGTAA CGCTGACGAT CTGCCGGCTT TGAAGGTTGG GGACGCTGTC 
TTCGGGACCA TGCCAGCTTT GCAAGGTACC TTGGCAACCT ATATTGCCGC TCCCCGGCAC 
CAAATGTGGC ATAAACCAGA GAGCCTTTCC TTTGTCCAAG CAGCCGCCTT GCCCTTGGTC 
GGACTGACGG CCTACCAATG CTTGCAGCCA CACATGGCTT TTCGCAATGA GAAGGATGGT 
GCTTCCAATG CGTCCGCATC TTCGGTGCTT GTTGTTGGTG GAAGTGGCGG TACCGGTCAC 
GTGGCGATTC AAGTAGCCCG CAATCTCGGG GCCCGTTGCG TGACAGCGGT TTGTTCCACG 
CGGAATGTGG CATTTTGTCA CCAACAGGGT GCCACCTATG TGGTCGACTA CACCGCCAAT 
GGCGGAGACA AAGATACGTT GCGGCGGCAT TTGCTCGAGA CCGGTCCCGC TTGTCCGTTC 
GATATCGTGC TGGATTGCGT CTCGTCCGCT GATCCCCGTG ATCAACAAAC CTTTTCGTAC 
CGCCAACTGC TGCAACAAGA TGTCCATATT CAGAAGCTTT TGAACGAAGC CGCTGTGTAT 
CGTCGTTTGG GTGGACCGTC CCTCGATTGG CTCCGGGCCG GGATGGAACA GAAGCTTGGT 
TGGACGGGTG TCTGGAAGTA CACAACCACC AAACGGAATT CCAACGACGA CCGCTTGTTT 
TGGATTCGGT TTCCCCATAC GTCGTTACAG TTGCAAGCAT TGTCTATCAT GGCCAATCAG 
GGCCAGCTAC TGCCCAAAGT GGAAAAAGTG TACAGCTTCT CCGCCACCGA CGTTGAAAGG 
GCCTTTGACG ATTTACTGTC CCGTCGAGTT CGGGGCAAGA TTGTGGTGGA ATTGGTCAAG 
GAGACCGACC AGCAGAAAGA CTAGTTTGTT ACTCTAGTTG CCACAGCATA GCGAGTATTT 
CATCCGTGGA TGGCTTATGG AATTGAAACA GGCAAAACGA GAACGAGGTT TTACGGATTG 
TACTATTAGA GCATCCATCG GACGGAACAG GGTGCGGAAT GCTTCTAACC ACGTTTGCAG 
ACGAAAGGCA TGAAAAACAT AGGGATCGAT GAACCGATAT CGATCGCAAA AGAAGCGTCC 
AAGTCCAGCA TCCCTTTTTG ACGATGACTA CAAAGATGGA AAAAGGGGTT TTGTTTCGAG 
GAAATATGTG ACAGACGAAT TCTCCGCTCA ATGAAGATAG GAACAGGGTG TTTTGTCAAC 
GCGGAGTGTT CTCGACTGAT CGGTTGACAC AACACATACA GTAAGCGAAT GACTGCCCTT 
AGTGACACGC GGGTACATTT GTGGTCGTGG ATGCTCGTCC TCTTCGGAAC GATACCCTTC 
ACAACTATAA GGGGGTACGC AAATGAAACA GGGTACGGCA ACACAGGGTC ATGTCCTGAA 
ATGTCGGGGT CTGGAGTTTG CCGGCGTAAA ACGTCACCAT AGGTGACAAT GTATACTCCG 
AGGATACCCA AACTCGGGAT CCGGTGTCTA CCCAACAAGG AATCACTCGA TTTGCTAGCT 
GAACAACGGG TCAAAGTCTG ATCACGGTTC TTCAATATTT TGTTTTCAAT TTGATTTTTA 
CAACGGTGAC AGAGCGAGCA TCGCTTTTCA TCATAAGTAA TGTTTTCCTC GATCGCGTTT 
TTTTAGGATT ATTGTGTCAA GCAGGAACAA TTGATTACAT CGGCCGATAT TCTGGTACAT 
GATTCTACAC CCGTCTACGA AGGCTGCGAA CTGGCGCTCC CCACATGCTC ATGAGAATGT 
CCCCAGCCCC CTTGGGTCTC ACACAACAAT CAAAAACTAG ACGGATTTGC ACCCAC 

 

Protein sequence

MGAASSFLCT QADAIPGQLI AGTLPAVRHC IVYGKEDGTL REETQQLPTV TDQSDHVWVR 
VHAVGLNPVD AKNVVGDKFP HHWRIVRSWV RSALVAGTIP GFDYAGTVAA LPKHGRALKC 
NADDLPALKV GDAVFGTMPA LQGTLATYIA APRHQMWHKP ESLSFVQAAA LPLVGLTAYQ 
CLQPHMAFRN EKDGASNASA SSVLVVGGSG GTGHVAIQVA RNLGARCVTA VCSTRNVAFC 
HQQGATYVVD YTANGGDKDT LRRHLLETGP ACPFDIVLDC VSSADPRDQQ TFSYRQLLQQ 
DVHIQKLLNE AAVYRRLGGP SLDWLRAGME QKLGWTGVWK YTTTKRNSND DRLFWIRFPH 
TSLQLQALSI MANQGQLLPK VEKVYSFSAT DVERAFDDLL SRRVRGKIVV ELVKETDQQK 
D