Gene PHATRDRAFT_40624 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_40624 
Symbol 
ID7198484 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011692 
Strand
Start bp481166 
End bp482030 
Gene Length865 bp 
Protein Length266 aa 
Translation table 
GC content46% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002184625 
Protein GI219128868 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTAGCAA GCACTGGACA AATGACCAGC AGCACTGTCT TCTCGCATTT TTTGGATAAT 
GTTTTCTCAA TTCCCCAAGG GCATCCAATT CGGCTTAGCT TTGCTCAGCA AGGGTATGAT
ACCGTGGAAG ACCTTCTCGG TATTTGTGAG AATGAACTTG GTACCTTTGG GTATGTTCCT
CCAACAAGCT TGGACACCAA TGACAACCCC CAGTGGACCC CATTGCTCAT GGCACACCGA
CAGATCCTTC GCCATTTTCT ACGTTGGCAG GCCTCACTTG AACGGAAAAA GGGAAGTTCT
TTAGACAATT CTGAGCTCGT TGAGTTGACC AGTAGTGACT TTGCCTTCTA TAAACGGTCG
GCACTTGGCC AAGTTTCAAG CGTATTGACC ACTGCAACAT CTTCTTCGAG CGCCCCGGGC
ATACCTAACA AACCTCGGTC GGTTTTTTAC GGACAGAAGA AACCTGTTTA TTGTAAAGAA
GATGCAACTA CCCTGTCTGT CAACAACACC AATGCAATCA CGTACTGTTC GAGTGTACAT
TCTGCATTGA GATCCGGAGC AACCAACCTT GACCTTATGC CACAGGATGG GGAGAGTATT
CCTAAACCCA TCAGCTTTGT CAAGCCCCTT GGAACTGAAA CCCACAATTC CTGTGCCTTT
AAGGGTTTAC CTGGTTTCAC TCCTGACAAC CTCATTGGAA AAACTTTTCT AACCGACAGT
CAGGATGATG GGGAGCTATT TCGTGAACGG CAAACTTTCC CAACTGATAC TCAGGATGAT
GGGGAGCAAC TGTGTGAATG CAATACAGGA AAATTTCTGG AATGTGATAA ACCATCTGAT
GAAAAAATTT TGGAGGGACT TGTAA
 
Protein sequence
MLASTGQMTS STVFSHFLDN VFSIPQGHPI RLSFAQQGYD TVEDLLGICE NELGTFGYVP 
PTSLDTNDNP QWTPLLMAHR QILRHFLRWQ ASLERKKGSS LDNSELVELT SSDFAFYKRS
ALGQVSSVLT TATSSSSAPG IPNKPRSVFY GQKKPVYCKE DATTLSVNNT NAITYCSSVH
SALRSGATNL DLMPQDGESI PKPISFVKPL GTETHNSCAF KGLPGFTPDN LIGKTFLTDS
QDDGELFRER QTFPTDTQDD GEQLDL