Gene PHATRDRAFT_40612 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_40612 
Symbol 
ID7198476 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011692 
Strand
Start bp455047 
End bp460692 
Gene Length5646 bp 
Protein Length1097 aa 
Translation table 
GC content51% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002184617 
Protein GI219128852 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACACCCA CCACTACACC TAAAAGCCTC ATGGATTCGT TTCCTCACAC CACGCTAACA 
CCCATTGCAA CTACAACTTC GTATCCAACG TACGAAAACC TACGTAAAAT GCAGTGGGAG
CTTAACGACA ATGCTGAATC TATCGAATCC GAATTCGGCG ACGGCAATCA CGGCCACATC
TTTCTCGTCA TTCCCGAAGC CGAGTATCTC GAACTCACCG ACGGCATTCC TTGTGTGCCA
CCCGAAAAAC CTCCTATCAA CGTTGACCAT CCAAATGGAG CCACCGCTCC TCAGATCACC
GAAGCGAACC GTCGCAACAC CAATGAAAAA TTTGCGTACA AACAGTACCA CGACGCCACC
AAGGCTATTC GCAACCAGCT CATTGCGGCC ATTCCCCTCA GCTACATTGA GTCCCTCAGT
CACCCAACTC GCGGTTTCAA CAAAGTTCCT CCCATCGACA TCATTACCCA CCTTTGGGCA
CGCTTTGGAA AAATCCGTTC CAGCGACTTG CGTGCCAACG AAAAACGCAT GAAAGCAGCC
TGGCACCCCC CGACTCCCTT CCAGGACCTC ATCAAACAAC TCGACGATGG TAAAAATTTG
CGGCGGCTGG TAAAGAAATC ATTGATGACC ATGCCCTTGC CCGAATGGGT TACGACATCA
TTGACGACAC TGGCTTGTTT GACCTCGCTT GTCGTGAATA TCGTTTCAAA GACGAAATCG
ACAAAACCAT GGCCACCTTT GAAGAGCATT TTCGTCTCGC TGACCTTGAT CGTACCCTCA
CCGTTACCAC CAAATCCGCC GGCTTCCACG GAGCAAACCA GATGTCCGCT ACCACTACCC
CCACTCCATT GAACACCGGT AAGCAGTCGT ACTGCTGGAC TCACGGCATT CTGAAGAATC
ACAAACATAC CAGCTTAACA TGCGAGAAAA AAGCCGACGG CCACCAAGAC GCCGCCACCC
TCCAGAACAA ACTCGGCGGA TCCACCAAGG TATATCAGTA CACGCCTCCC AAATAGGAAA
GAGGGACGGC CAATTGCACG AGTGTGCCAC TGACAACTTA TCATAACAAA AATAAGTTTT
CAGTTGACAC CAACACTCCT GCAATAGCTT CCTCCCCGCC TCATTTCCCC ACCATTGCCA
TTGCCGATAC CGGATGCACC GGACATTATC TGAGCACCAA CATTGCCCAT ATAAATTCCA
CTCCTGCCAA TCCTGGCATC ACCGTCACCT TGCCGGATGG CAGCACCATT GTTTCCAGCC
ACGTCACAGA GCTCGACATC CCAGACCTTC CTCTTGAAGC CCGTATTGCC CACATTTTTC
CTAAATTATC GTCGGGTTCC CTCATCTCAA TTGGACAACT ATGTGATCAT GGCTGCACCG
CCACCTTTAC CTCTAGTGCA GTCACCATTT CTCTCAACGA AAAAATCATT CTTCGCGGCA
CTCGATCTGC CCCAAACCGC CTGTGGAATT TGAATGCGCC CAGCGTGACT CCCACTGCCG
CACCAATTCC TCCCCCTGGC TTTCCCGTCG CCAACCACCT TGAACATACC TCTTCCCTCT
CTGATCGGAT TGCATTTGTA CACGCCTCAT TATTCTCGCC ACAATTATCC ACTTGGTGCA
AGGCCATCGA CGAGGGCCGC CTGACAACTT TTCCCGACAT TTCTTCTGCC CAAGTGAAAC
GACACCCTCC TCAGTCTGCG CCCATGCACA AAGGCCACTT AGATCAACAA CGAGCCAACA
TAAAGTCCAC TCAGCTCAAG CCCTCTGCTC TACTTGCTTC GGCACCCCAC GGTACCGAAC
ACGACGAAAA TCCAGTCCCC GACAACCCAC CGGCCCTTCG ATCGAACTTC TTGTATGCCG
ATGCCTACGA AGCCACCGGA AAAATCTTTT CGGACCTCAC AGGACGCTTT GTGACCTCCT
CCAGCTCCGG CAACGCATAC ATGCTTGTAG TCTATGACTA CGATAGCAAC TTCATCCACG
TCGAACCCAT GAAAAATCGT ACCGGTCCCG AGATCCTGGC GGCCTACCGC CGCGCCTTCG
ACCTTTTTTC CTCTCGAGGA CTCCGTCCCC AGCTCCAACG ACTTGACAAT GAAGCCTCCG
CTGCCCTGCA ACAATTCATG ACTGACTCCA AGGTTGATTT TCAGTTAGTG CCACCTCATT
TACATCGGCG CAACGCTGCC GAACGAGCCA TACGCACCTT TAAAAATCAT TTCATCGCCG
GGCTATGCAG CACCGACAAA GATTTCCCAC TTCACCTCTG GGACCGCCTT CTCCCACAAG
CAATCATGAC CTTGAACCTT CTCCGCGGCT CTCGAATTAA CCCTAGACTC TCTGCTTGGG
CCCAAGTTCA CGGCGCGTTC GACTTTAACC GCACTCCACT GGCGCCCCCT GGCGTAAAAG
TTCTCGTACA CGAAAAGCCG TCTGTACGCA AAACATGGGC TCCTCATGCC GTCGACGGAT
GGTACATTGG CCCTGCCATG CACCACTACC GATGCCACCG AGTCTGGATC CACGGCACCA
CAAGCGAACG AATCGCTGAC ACCCTCACTT GGTTCCCGTC GAAAGTGAAA ATGCCAACCA
CGTCATCACA CGACACCGTC GTAGCGGCAG CCCGCGACCT TGCCAAGGCC CTTTCCAATC
CCACTCCTGC CTCTCCACTT GCACCATTAG GCACCCAAGA GCGCGCTGCT CTCGAGCAAT
TATCGAACAT TTTTTCGAAT TTTTCGGACC CGTCCATCAC TCTCGAAACG AAATCTCCTG
CTGCTCCCTC GGTACCCCGA CCAGCCCCTG CAACAACCCC ACTGCGAGTC CAATTTCAGG
ACCTGCCCAC GGAACCACTT CCGAGGGTGC CTCCCGTTCC CACTGCACCA GTTACACCGC
ACACACTTCC GAGGGTGCCA ATTCTGGTCC CCGACACAGA AACTTACAAG CTCGTAACCT
GTAACCCTCG TCAGGCCCGC CGTAGGGCCG CGCGCTTGGC AAAACAAGTC CTTGCCGACG
CTAAGTCGTC TCCTCTCGAT CAGACTCCCC TTTTAACCAA CCCGGCAGCA CCAACGGCTC
CCCATCACGG TCACGGTACG AGACTACAAA CCTCTCGCTT CCCAGCGCAC GCATTCTGGA
CTGCCAACGC CGTCGTCGAC CCCAACTCCG GGGCCGCCTT AGAATACTCA AAATTGAAAA
TTTCTACCGA AGGCGCCGAA TGGATCCAAG CAGCCGCCAA CGAAATGGGA CGCCTCTCGC
AAGGCGTCCA ACCTCACATG CCCACCGGAA CAAACACAAT TCACTTCATT CCTCACACGG
AGAAGCCCCA CGACCGCAAG GCAACGTACC TCAAGATCGT CGCCGCCATC AAGCCCCACA
AGGCCGAGAA GTATCGCATC CGCTTTACTG TCGGAGGCGA CCGCATCGAA TACAGCGGCC
CCACCAGCAC TCCAACTGCC GCATTACCCG CCATCAAAAT TTTAGTCAAC AGCGTCATCT
CTACAGACGG TGCCCATTTC ATGACATGTG ACCTCAAGGA TTTTTATTTG GGCACCCCTC
TCCCGGTGTA CAAATACATG CGTATACCGG CCAAGCACAT TCCTGCATGC ATCATGGAAC
AATACAAGTT AGCCCCATTA GTGCATAACG ACAATGTCCT CGTCGAAATT CGCAAGGGCA
TGTACGGCCT ACCCCACGCT GGACGAATTG CGAACGATCG CCTTCTCCAA CATTTGGCTT
TGGACGGTTA TCATCAAGCC AAGCACACAC CCGGCTTCTT CACTCACGAA AGCCGTCCCA
TTTCCTTTTC CTTGGTCGTC GACGATTTTG GAGTAAAATA CGTCGGCAAA GAGCACGCTG
AACATCTCGT CCAGTGTCTC GAAAAATTGT ACACGGTAAC CACGGACTGG ACCGGTTCCT
TGTACTGCGG TCTCACTTTC ACCTGGGATT ACAATGCACG ACACGTTGAC ATGGCCATGC
CGGGATACAT TGAAAAAGCT CTCCAGCAAT TTCAACACAC GGAACCGACT CGACCGCAAC
ATTCGCCGCA CGCTTGGGAA CCGCCATCGT ACGGCGCCAA GATTCAACTC ACCAGCGAAA
CCGTTGTTTC TCCCCCGCTG GACAAAGCCG GCATCACTCG CCTTCAAGAA ATCATAGGGA
CTCTTTTGTA CTACGCTCGC GCCGTGGATT CAACTATGCT TGTGGCCCTT GGCACCCTCG
CGTCCGCGCA GACACAAGGT ACCGAAGCGA CTGCACAAGC AATTACCCAA TTGCTCAATT
ATTGCGCAAC GCATCCGGAT GCAACGGTAC GATTCAATGC TAGCGATATG TTCTTACACG
TTCACAGCGA TGCTTCTTAT TTGTCAGAAA CCAAGGCCCG GTCCCGATCT GGCGGAATTT
TCTTTCTAAG TTCCAAACCC ATCAAGGACC CTAAACCGAA TTCGGAGCCA CCGATTTTCA
ACGGTGCTAT TCATGTTCAC TGTTCTATCA TGAAATCTGT TCTTTCCTCC GCCACCGAAG
CTGAACTTGG TGCACTGTTT TACAATGCCA AAGACGCTAT TGAATTACGT ACTACTCTAG
AAGCCATGGG CCATCCTCAG CTGGCCACTC CTATCCAAAC CGACAACGAA TGCGCTTCCG
GCATAGTAAA TGAGACCGTC AAACAAAGAC AATCAAAAGC TATTGACATG CGATTTTATT
GGATTAAAGA CCGAGTCAAG CAAGGCCAAT TCAATGTTCA TTGGCGAAAA GGAGTTGATA
ATCTTGCAGA TTATTTCACG AAACATCACT CCCCTTCTCA TCATCGACTC ATGAGATCTC
GTTATTTGTT GGATTTGCAC AAACCTGCCT CCAAGCCAAG TTTGCCTGAG TCAAATTCAA
GTTTGAAACG AGGGTGTGTT GATATGAAGA TCGAGCCCAA TCATCCTATC CCTATCAGTT
ACGGTACTGA TGACAGTTAC CCTATCAGTT ACGGCTCTAC TGATAGTATC CCGATTCAAA
TCACAAGTAC TTACAAGACA AGAACGCCAA CCGGGCATTC TAGTCTTCCC GCTGACATTT
CAAACATGTC ATTGCCATTC AAACCAGTCA TTGAGAGTGT CTCCGAGCCA TACAAACCAA
ATAGCGATTC TCAATTGACT CATAATTCTT ATTAGTTCAT CGATTTCCAT CATTCGCGTT
CTTGCGTTTG TAGAGCTCAT CAATAAGTGG ATCGATAAAT AAATTAAACG GATCGCCCAT
ACTCTTATCA GCTTTTTGTC AAACGATGTG GTATTGGTTA CGGCAAGGTC AAGAAAAAAA
GAATTTTCAT GTGCTATAGT TTGGGCCAAA ATTCTTCCAA GAGATTCCAA GACGCTCGTC
TTTTGTTCCA CTCCGATCGA ATGCATTTCC GTGTCGAGGA CCCTCGAGCC ATTCTTGCGA
GTTGAAGATA AGGCAAGACG ATGGAGCCCC GTAGGCTGCC AAAGAACTGT TGATTCGGTT
AAGAGAAATA AGCGAAGACT CCGTTCCAAG CCTCCCGACG AAACCGATTT CGTCCCAATC
CGTCTGCCTC AGAGCTTTTT GGGATGCATG AATCGACAAG AACGACAGCA GAATAACAGC
AGCTCCTGCA AAATAGACAA TGAAATAATT CGAGAAATGG CGATTCATTT CCCCAACTTT
TGGTGA
 
Protein sequence
MTPTTTPKSL MDSFPHTTLT PIATTTSYPT YENLRKMQWE LNDNAESIES EFGDGNHGHI 
FLVIPEAEYL ELTDGIPCVP PEKPPINVDH PNGATAPQIT EANRRNTNEK FAYKQYHDAT
KAIRNQLIAA IPLSYIESLS HPTRGFNKVP PIDIITHLWA RFGKIRSSDL RANEKRMKAA
WHPPTPFQDL IKQLDDEIID DHALARMGYD IIDDTGLFDL ACREYRFKDE IDKTMATFEE
HFRLADLDRT LTVTTKSAGF HGANQMSATT TPTPLNTGKQ SYCWTHGILK NHKHTSLTCE
KKADGHQDAA TLQNKLGGST KFSVDTNTPA IASSPPHFPT IAIADTGCTG HYLSTNIAHI
NSTPANPGIT VTLPDGSTIV SSHVTELDIP DLPLEARIAH IFPKLSSGSL ISIGQLCDHG
CTATFTSSAV TISLNEKIIL RGTRSAPNRL WNLNAPSVTP TAAPIPPPGF PVANHLEHTS
SLSDRIAFVH ASLFSPQLST WCKAIDEGRL TTFPDISSAQ VKRHPPQSAP MHKGHLDQQR
ANIKSTQLKP SALLASAPHG TEHDENPVPD NPPALRSNFL YADAYEATGK IFSDLTGRFV
TSSSSGNAYM LVVYDYDSNF IHVEPMKNRT GPEILAAYRR AFDLFSSRGL RPQLQRLDNE
ASAALQQFMT DSKVDFQLVP PHLHRRNAAE RAIRTFKNHF IAGLCSTDKD FPLHLWDRLL
PQAIMTLNLL RGSRINPRLS AWAQVHGAFD FNRTPLAPPG VKVLVHEKPS VRKTWAPHAV
DGWYIGPAMH HYRCHRVWIH GTTSERIADT LTWFPSKVKM PTTSSHDTVV AAARDLAKAL
SNPTPASPLA PLGTQERAAL EQLSNIFSNF SDPSITLETK SPAAPSVPRP APATTPLRVQ
FQDLPTEPLP RVPPVPTAPV TPHTLPRVPI LVPDTETYKL VTYSPFNQPG STNGSPSRSR
FLSNDVVLVT ARSRKKEFSC AIVWAKILPR DSKTLVFCST PIECISVSRT LEPFLRVEDK
ARRWSPVGCQ RTVDSVKRNK RRLRSKPPDE TDFVPIRLPQ SFLGCMNRQE RQQNNSSSCK
IDNEIIREMA IHFPNFW