Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_40605 |
Symbol | |
ID | 7198382 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011692 |
Strand | - |
Start bp | 408439 |
End bp | 408978 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | |
GC content | 52% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002184614 |
Protein GI | 219128845 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.359503 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGTCGC TTCTGATAAT GGTCGCTTTT GTTCAAGCCT GTCGTTGTCT TGCCTTGGTC AGCGTTGATG TTTCCAACCG GCAATATAGC ACTCGGCCAG TCTCGCCGCT CCAATTGCAA ATGGCTAACA GCGACGGCGA TCAGAACAGC AATCAGTACA CCTTTTGGAC TTCCCGTGGA ACGAATGTGA CCATTACCGA TGATCTCACA CCCCCGTTGG TAAAATTCCG CAAGGAGTCG TTGCTCTTTG ACGAGTCGTC CGCTAGTAAG TACAACAACG ACGCTCTCCG CCTGTGGCGC GGCCTGAAGT CCCGCCTACC ACAAGTGCTG ACGGGAGCAC GACAAGTGGA CACCGCCGAC GATAATCCTC TGGCTGGAAT TTACAACATG ATATTTGTGC GACTACCGAC CGTTGCGGCA GGATTCGTTT ACGGCAAGAA TCTGTACCAA GGTCATCCAC TCATTGTGGA CGTCGGCAAT GGTCCGTGGG AGGTGAATCC GTTGTTCGTT TTAGCGACTC TGTACGTCAT TTTGAGGTGA
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Protein sequence | MKSLLIMVAF VQACRCLALV SVDVSNRQYS TRPVSPLQLQ MANSDGDQNS NQYTFWTSRG TNVTITDDLT PPLVKFRKES LLFDESSASK YNNDALRLWR GLKSRLPQVL TGARQVDTAD DNPLAGIYNM IFVRLPTVAA GFVYGKNLYQ GHPLIVDVGN GPWEVNPLFV LATLYVILR
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