| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_40588 |
|---|
| Symbol | |
|---|
| ID | 7198373 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011692 |
|---|
| Strand | - |
|---|
| Start bp | 368474 |
|---|
| End bp | 369637 |
|---|
| Gene Length | 1164 bp |
|---|
| Protein Length | 387 aa |
|---|
| Translation table | |
|---|
| GC content | 57% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002184605 |
|---|
| Protein GI | 219128827 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTAGCA ACTCGGACTC GTTGACGGAG ACTAGCAAAA AACGTGTTTC CAGCCCGAGC
AGTCCCACAG AAGCCGACGA AACGAACCCG TTCCTCGCGA GTATGAAAGA GGACGAATAC
CAGAGAGGCT TTCTGACTAT CGGATTCATA ACGCTTCTCA ACGCCTCCTG TAATCCCCTA
TGGCACGCTG CCTTTGCTAA CGGTGGTCCT TCACCATTTT TGTTGAATGC TGGAGTTAGT
GTAGTTGCAC TGCTTGGCCT TTTGGTGGGT GGACCCTTGC TGGATCGACG AACACCCACC
GTGTCCAATC TCGCGGCTAC CGCCTCGGCA GCGTTGCCAA CCGAGGAGGC TGCGGACAGC
ATTCCCTCGA ACGGAGACGT TGTCGACCCA ACGTCCTCTC CCAACGCGAA CGTACAACAC
GTCTTGGGTG GTATGGAGCT CGGCCTTTGG AAGTTCCTCG GCACAACCGC ACACCTCTAC
GGATTGAGTC TCACCACGGC CGATCACGGG GCCTTTTTGA TCCAACTCAC CACACTGATT
GTTCCCGTGG TGCAAGGGCT GCAGGGTGAA AAAATTCCCC GACAGATTCA GTTCGCTGTT
GGGCTAGCCT TGCTCGGAGT TTACGCCTTT ACCCAGGACC CCAGTGGAGC CGCCACCACA
GCGGTTGCTG CTCAACAGCA GGCTACCGGA GACGCCCTCT GCGTGGGCGC CGCCGTCTTT
TACAGCTTTT ACGATATTCA GACCTTCAAA TGGGGCAAGC AAGTACCTCG TAAACAACTC
GTCACCACCA AGGTTGCTAC GCAGGCGGCC TTGTCCGTCG CCCTCTGCGC CACCGTCGCC
AGTGGTGACA CGGTCGACTT TTTCCGGGCC AACCCGGATT GGGCCACGTC CGGTCTCCTC
GTACCCGTTA TTTTATGGAG CGGACTTATT GTCAACGCAC TCGCAACCTT TCTACAAGTT
GGCGGCATGC AGGCGGTCGG TCCGACCCGA GCCCAAACCA TTTTTGCCTC CCAGCCTTTG
TGGAGCAGTA TGCTGGCGTA CGCGTTTCTG GGGGAAACCG TCGGGGTCCA GGGAGCCGTC
GGCGGTTGTG CCTTTTTGTT CGCACTCTTC TTGGCCGCTA CCGCACCACA AGAGCCCAAG
ACTACCCAAC AGTCAACGTC GTAA
|
|---|
| Protein sequence | MISNSDSLTE TSKKRVSSPS SPTEADETNP FLASMKEDEY QRGFLTIGFI TLLNASCNPL
WHAAFANGGP SPFLLNAGVS VVALLGLLVG GPLLDRRTPT VSNLAATASA ALPTEEAADS
IPSNGDVVDP TSSPNANVQH VLGGMELGLW KFLGTTAHLY GLSLTTADHG AFLIQLTTLI
VPVVQGLQGE KIPRQIQFAV GLALLGVYAF TQDPSGAATT AVAAQQQATG DALCVGAAVF
YSFYDIQTFK WGKQVPRKQL VTTKVATQAA LSVALCATVA SGDTVDFFRA NPDWATSGLL
VPVILWSGLI VNALATFLQV GGMQAVGPTR AQTIFASQPL WSSMLAYAFL GETVGVQGAV
GGCAFLFALF LAATAPQEPK TTQQSTS
|
|---|
| |