| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_40578 |
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| Symbol | |
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| ID | 7198367 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011692 |
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| Strand | - |
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| Start bp | 329600 |
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| End bp | 332419 |
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| Gene Length | 2820 bp |
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| Protein Length | 860 aa |
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| Translation table | |
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| GC content | 55% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002184601 |
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| Protein GI | 219128818 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAATGT CCTCCGAGTC TGACGAGCCT CCCAGCTCGC CATCCGCGGT GGCGCCATCG
CAGTCGGAAG AAATCCGGCT GGATCCGGAC CAGCAGGCCG CCTACGACGC CGCTTGGCAC
GCCTTGACGC AAAGCCTAAC GACCGATTTG GATCCTCCAC CACCCACGGT TGTTTCACTG
GATGATCCGA ATCGTGCGGA TCGGGACGCC GACGAAGAGG ACGCTCCGCC CGTAGCCTTG
GTCACTCCCA TGCGCGGTCA TCACGCACTC TTCCGAGCCC TCGAACGACT CGAAGGGAAT
GACAAACGCG AAGAAACCCT GGTGACGCGG GCCCCTTTGA CGAATACTCT CACGAGCGTG
GTTTTGCAGG ATTCGTACAC GGACAGCGCG GCGGCGCTGG CGGCCTTGCA AGCGGCGGGT
TCCAGTTTTC CGCGCAAGGT CTGTCAACAT CCGTTTCGGA AAAACGATAT CGTCTGGGTC
TGCCGGACCT GTCAAGCCGA CGAAACTTGC GTTCTTTGTC ACAACTGTTT TTCCCAGTCG
AATCATGAAG GTCACGACGT TGCCTTTTAT CACGCTCAAG CCGGTGGTTG TTGCGATTGC
GGAGATCCGG ATGGTACGTA CGAACAGTAG GGAATTGTGT TTGGAATACT ACCTTACGGT
TCTTTGGTGG CGCGAATCGT CCGGACGCCA AGTATCTCAT TGTCTTGTTT CGTCTTGTGG
CTCCAGCTTG GGACCCCGAC GGGTTTTGTC CCCACCATGG CCCCAACGCC GTAAACGCCA
GTGATGCGCG GCTGCCGGAA GGCTTCACGC ATCGGGTCCA AGGCGTCGTC CCCGCCGTCG
TGGATTGGAT GGTCCGGGAC GTGGCAGCTG TGGGGGAAAC CGGTTACGCC CGATGTCACG
CTCCAACACC CTTACGGCGT GCAAGCTCGG ATCACGAAGA CCTGCCCCCA TCGTTACCGA
GTTTGGCACA ACGCTCCGCG TCCATGCCGC TGGAACAGGA GCTCCAGTCG GTTGGGATGG
ACATTGATGA GGAACTCTTT GCGGAGACCG CAGAAAACGA TGAAACGGCC GCCGACGACG
AAGACCTCTT GTCGGATCGG TTTCATTCGG TGGTCGATTC CTTGCGTATG TACGGCCCTT
CCAACTTCAA TCACCGCACT CACGTCTTTT CGCCGACGGC GGCGTCGAAA AGTGGGGCCG
CGGCCGATAG TCTCCGGCGC CACGAAGCCC GGGCCGAAGC TTTGGGGCGT AAAGGTGCTA
CGGGTGGTGG TTTGTTCCTG GTACTACACC ACGATGACGT TCACACTTCA CAGTCTTGGC
TAGACGCGTT ACGTGAATTT CTGGGATCTA CCAATTATTA TACGGACACT TTGTTGGGTA
AACTCATCAA AGCGTTGAAA ACGTACGGGC AGCTGATCGT TTGGGGGACG ATGGAAGTCG
CCACGGAGGT GGGCTGGACT CAGGTGCAAC TTTGGATGGA TGGTGACAAG GTGGCATCGA
CAAGAATTGG GGCACTCTTG CTGGAGCATG CGAGCCGCTT AACTCGGCAC GGGGCATTTT
GTAGTATTTT GACCCGTGAG GAGCTGTGGT TGGAGCAAAA GGCAGTTGGC GTCTTGCAGT
GGTTGTCCAA ACTCGCCGAA TCCTGTCACC CGTTTTGCAA TACTGTTGCG GCCTGCATTT
TACCCAACCG CCATCTAGTG CCTCTGCTCG AGGCGGATTT CAAAATGAGT GCGCGGGTTA
TGAAAGCTTG GTATTCGCTT TTGCTGACTT TGCTGGCGGT CCCGACCTTC AAGTCGCACC
TGGCAGCGGC GTATTGCGAT ACATATCGGA GCGTGACTGC CAAATATGCG CGTGGTATGG
GCGTCTTGGA ACGCAGTGGC TACCAATTGT CGGTGCAGTT CTTGAACCGT GTGCAGTACG
TGGTGGATCT CGTCCAGGGT CGGGACTTGC TGGGAAAGTT GGGCAAGACT CTACTGGACA
CCTTGCTGGT TGCTCGCCGA CCTCGGAACC TAAACGGGCG ACTCAATCCG AATCATCATG
TTTTGGCTCA TCGCCGATAT TCGCCGTGTA TTTCTGATCT CAAGTGCGTA CTGAATGTCA
AGGGGATGCC GCGGCTCTTT GCAGCCAAAG GGGGCACCTT TTTGGGCGAC TGGATTGAAG
TCTTGAGCAT TGCACAGTTT ATGGATCCAC AGAGTTGGAG GCACTGGACT TTCGGACACG
TCGAAGATGA ATCTCGTGGA TGGGTGGGTG CGTTTAATGC TAGCATTTCG CTTGGTAGTA
TTTTTGAACG CTTGCTAAGC TGGGAAGATG AAGAGCCGTC GCCGATCACC GATTCGACTT
CCCCTCTTTC ACGAAATCTC ATGCCTTGTC TCGAGCTTAC GTTTCACATT CTGGTGGAGG
GGGTATCTCG GTGGCAGAAA TCGGAAGTCT TATTTTACGA TTCAACTCCA AACTCTTCCG
TAATCGAAGT CCACAAACGA TGTCCCGCAA GTCTTCCCTT TTCGACCATT GCAGCACAAC
GAGGGACAGC ACTGGCAATG AGGCAGCTTC CCATTTCCCA AGTTACCCCT TTTAGCTTTC
ACTTGCCTTT GCACCGATTC GTAGCTGGAT GTATACGAGA GCTGTGCCTA CGTAAGCATG
ATCTTACGGG CGGGATGGCT GGCCTTATGG AGCTGTTGCG AAGCGAACTG TCTCCGAGAG
ATCAAGACGA GCTTTTTCGC GGATTAATGG AGTTTCCTGT ACTCGTCTTA TCCAGGGCAT
CCCAGATTCG TGCGTCGCTT TGGCGCCGCA ACGGGCCTGC CCTGGGCGAT CAAGTGTTGA
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| Protein sequence | MEMSSESDEP PSSPSAVAPS QSEEIRLDPD QQAAYDAAWH ALTQSLTTDL DPPPPTVVSL
DDPNRADRDA DEEDAPPVAL VTPMRGHHAL FRALERLEGN DKREETLVTR APLTNTLTSV
VLQDSYTDSA AALAALQAAG SSFPRKVCQH PFRKNDIVWV CRTCQADETC VLCHNCFSQS
NHEGHDVAFY HAQAGGCCDC GDPDAWDPDG FCPHHGPNAV NASDARLPEG FTHRVQGVVP
AVVDWMVRDV AAVGETGYAR CHAPTPLRRA SSDHEDLPPS LPSLAQRSAS MPLEQELQSV
GMDIDEELFA ETAENDETAA DDEDLLSDRF HSVVDSLRMY GPSNFNHRTH VFSPTAASKS
GAAADSLRRH EARAEALGRK GATGGGLFLV LHHDDVHTSQ SWLDALREFL GSTNYYTDTL
LGKLIKALKT YGQLIVWGTM EVATEVGWTQ VQLWMDGDKV ASTRIGALLL EHASRLTRHG
AFCSILTREE LWLEQKAVGV LQWLSKLAES CHPFCNTVAA CILPNRHLVP LLEADFKMSA
RVMKAWYSLL LTLLAVPTFK SHLAAAYCDT YRSVTAKYAR GMGVLERSGY QLSVQFLNRV
QYVVDLVQGR DLLGKLGKTL LDTLLVARRP RNLNGRLNPN HHVLAHRRYS PCISDLKCVL
NVKGMPRLFA AKGGTFLGDW IEVLSIAQFM DPQSWRHWTF GHVEDESRGW VGAFNASISL
GSIFERLLSW EDEEPSPITD STSPLSRNLM PCLELTFHIL VEGVSRWQKS EVLFYDSTPN
SSVIEVHKRC PASLPFSTIA AQRGTALAMR QLPISQVTPF SFHLPLHRFV AGCIRELCLR
HPRFVRRFGA ATGLPWAIKC
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