Gene PHATRDRAFT_40550 details

Gene Information

• Locus tag: PHATRDRAFT_40550
• ID: 7198448
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011692
• Strand: -
• Start bp: 241158
• End bp: 241871
• Gene Length: 714 bp
• Protein Length: 237 aa
• GC content: 46%
• Product: predicted protein
• Protein accession: XP_002184589
• Protein GI: 219128793

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTGCACCT TCATTCGAAT GATGAGAATG AACAATTTCG CCGTCACGTT GATGCGTCAG 
CGCAATGACA ATGATGCAGC CAAAACGATT CTCCGGACTC TCGAGCTGTT GCGAGAAACT 
GCATCTGGCT TCATTCCATC CACGAGTGAG CTAGAAAGGT GGAGGTTGAT GGGGGAGGTC 
GTATCTGTCG TGTTAAGTAA CGCTTTCGTC AATGAATTAT GTGGCGCCGT TGACGGGGTC 
GATAGCTCTA CTCCAGCTTT CTACTCTCGG GCTATGATTT TTTCGGTGGA TTCGAGAAGA 
ATTGCAACAC CAACATCTGA GAATCTTGCC ACAATTTCAA TGGTCCTTCT GTTCAATGCA 
GCACTTGCTC TTCAGAGGGA TGGTTTACGT ACTGGACAGA GTAGTGTTGT TCAACAAGCT 
CTTCCTGTTT ATATGAAAAT AATCGGTATT CTTGGGCCAT TGGATCTACA CGGCTCACAC 
ATTCCAGATA CCCTCAAAAC AATCAGCCTG GCAACAAGCG TCAACATTGC TCACGTGCAT 
CTCGAGTTTT ACAATCGATT AGAGGCAAAA ATTTGGCAGA CCCATTTTTC TGTTGCCTTT 
CAGTGCATGG AAAGATCGCA CATGAATTTC GATGACTTTG CGATTTTTGC AATGAACGCA 
TTCGTCTTCT CAATAGAGGG AGGTGTTGGA TTTCTTACCG CCGCAGCTGC ATAA 

 

Protein sequence

MCTFIRMMRM NNFAVTLMRQ RNDNDAAKTI LRTLELLRET ASGFIPSTSE LERWRLMGEV 
VSVVLSNAFV NELCGAVDGV DSSTPAFYSR AMIFSVDSRR IATPTSENLA TISMVLLFNA 
ALALQRDGLR TGQSSVVQQA LPVYMKIIGI LGPLDLHGSH IPDTLKTISL ATSVNIAHVH 
LEFYNRLEAK IWQTHFSVAF QCMERSHMNF DDFAIFAMNA FVFSIEGGVG FLTAAAA