Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_40535 |
Symbol | |
ID | 7198441 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011692 |
Strand | - |
Start bp | 185182 |
End bp | 186222 |
Gene Length | 1041 bp |
Protein Length | 346 aa |
Translation table | |
GC content | 57% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002184582 |
Protein GI | 219128778 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.706377 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCCAGTG GAACGCTCTC TTCTTTGATT TCTCCCCCAC GAATGGCACG GCGGGACGAG AGACAGAGTG TCCACCAACG GGATCCATCA ACCCCCACGG ATGCGGCCAG GAGTTTTCGT CGTCGAGAAC AACGACTCTC ACGTCGAAAG CTGATCCGCA TCGAAGGGCG TCCACCGCTT GATGACACTC TTCCCCCCAT CCCGGATCTA GGTGGCGGGA TGGGTGACAA CAGCTCCGAA AGTCCGTCGC CGATGCCGGA CCAAAGCGCG TCGGCCGAGC CTTTCACGGG GCAACCTCTG GCAACGCAAG GTCCCACGGT ATCTCCCGAC CAACAGAGTA CGCCGTCGCC TTCTACGACT GCCACGGAGT CTCCCACGGA GAAATATAGA GCCAGACGGA CGTCGTTTCC GCTGGTCCGA CCACTTGCAC CCTCTCCTCC TCCCTCGGCG AGTCCTGTAA GCCTTGCTCC GACCCTTCCA GAGTTGGGGT CTGTACAAAA CTTTAACACA CCCGGCGATG ACGTTGCGGT TCTCAAGGAT TTGTTACTGA CGGGAGGAAT TATGATTGTC TTTCTGTCGG CCGTGTTGGC CTTTCTGTAC GTCCAAAAAG GTGGAGGTCC GACAAAAGCC GCGGCGAACA CCGTTGTCCC GGACGTGGAC GACACCAACG AATACTCCGA CTTGGACGGT ATGCATCTAG AAGAAATCTA CGGTCCTTCC ATCTGCGAGC CACTTCCAGT TGATGCTCCG AGTCGGATCG CGACTTCCGG GATCACGGAG ACCAAGGCAA CCAAGGTCGG TTGCGTCGCA GGCAACGAGT ACGATCCCGA TCACGTTTCC GCTACCTTCT TCCATTGTCT GCATAAAATT CATCGATTGT GCGATACAAT GGACCGTGCA CCCAGTCTCG AGTCGACCAG CGAAGTAAGC TCCGTCTCCA TGAGCGAAGA CGAAGCGGTC CTGCACCTGG AGGTGTTCGA GGATGCGGGC GACATGAGTA TTTCAACCAG TGACGACTCT AGCGACAATC TCAATACTTG A
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Protein sequence | MPSGTLSSLI SPPRMARRDE RQSVHQRDPS TPTDAARSFR RREQRLSRRK LIRIEGRPPL DDTLPPIPDL GGGMGDNSSE SPSPMPDQSA SAEPFTGQPL ATQGPTVSPD QQSTPSPSTT ATESPTEKYR ARRTSFPLVR PLAPSPPPSA SPVSLAPTLP ELGSVQNFNT PGDDVAVLKD LLLTGGIMIV FLSAVLAFLY VQKGGGPTKA AANTVVPDVD DTNEYSDLDG MHLEEIYGPS ICEPLPVDAP SRIATSGITE TKATKVGCVA GNEYDPDHVS ATFFHCLHKI HRLCDTMDRA PSLESTSEVS SVSMSEDEAV LHLEVFEDAG DMSISTSDDS SDNLNT
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