Gene PHATRDRAFT_40535 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_40535 
Symbol 
ID7198441 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011692 
Strand
Start bp185182 
End bp186222 
Gene Length1041 bp 
Protein Length346 aa 
Translation table 
GC content57% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002184582 
Protein GI219128778 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.706377 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCAGTG GAACGCTCTC TTCTTTGATT TCTCCCCCAC GAATGGCACG GCGGGACGAG 
AGACAGAGTG TCCACCAACG GGATCCATCA ACCCCCACGG ATGCGGCCAG GAGTTTTCGT
CGTCGAGAAC AACGACTCTC ACGTCGAAAG CTGATCCGCA TCGAAGGGCG TCCACCGCTT
GATGACACTC TTCCCCCCAT CCCGGATCTA GGTGGCGGGA TGGGTGACAA CAGCTCCGAA
AGTCCGTCGC CGATGCCGGA CCAAAGCGCG TCGGCCGAGC CTTTCACGGG GCAACCTCTG
GCAACGCAAG GTCCCACGGT ATCTCCCGAC CAACAGAGTA CGCCGTCGCC TTCTACGACT
GCCACGGAGT CTCCCACGGA GAAATATAGA GCCAGACGGA CGTCGTTTCC GCTGGTCCGA
CCACTTGCAC CCTCTCCTCC TCCCTCGGCG AGTCCTGTAA GCCTTGCTCC GACCCTTCCA
GAGTTGGGGT CTGTACAAAA CTTTAACACA CCCGGCGATG ACGTTGCGGT TCTCAAGGAT
TTGTTACTGA CGGGAGGAAT TATGATTGTC TTTCTGTCGG CCGTGTTGGC CTTTCTGTAC
GTCCAAAAAG GTGGAGGTCC GACAAAAGCC GCGGCGAACA CCGTTGTCCC GGACGTGGAC
GACACCAACG AATACTCCGA CTTGGACGGT ATGCATCTAG AAGAAATCTA CGGTCCTTCC
ATCTGCGAGC CACTTCCAGT TGATGCTCCG AGTCGGATCG CGACTTCCGG GATCACGGAG
ACCAAGGCAA CCAAGGTCGG TTGCGTCGCA GGCAACGAGT ACGATCCCGA TCACGTTTCC
GCTACCTTCT TCCATTGTCT GCATAAAATT CATCGATTGT GCGATACAAT GGACCGTGCA
CCCAGTCTCG AGTCGACCAG CGAAGTAAGC TCCGTCTCCA TGAGCGAAGA CGAAGCGGTC
CTGCACCTGG AGGTGTTCGA GGATGCGGGC GACATGAGTA TTTCAACCAG TGACGACTCT
AGCGACAATC TCAATACTTG A
 
Protein sequence
MPSGTLSSLI SPPRMARRDE RQSVHQRDPS TPTDAARSFR RREQRLSRRK LIRIEGRPPL 
DDTLPPIPDL GGGMGDNSSE SPSPMPDQSA SAEPFTGQPL ATQGPTVSPD QQSTPSPSTT
ATESPTEKYR ARRTSFPLVR PLAPSPPPSA SPVSLAPTLP ELGSVQNFNT PGDDVAVLKD
LLLTGGIMIV FLSAVLAFLY VQKGGGPTKA AANTVVPDVD DTNEYSDLDG MHLEEIYGPS
ICEPLPVDAP SRIATSGITE TKATKVGCVA GNEYDPDHVS ATFFHCLHKI HRLCDTMDRA
PSLESTSEVS SVSMSEDEAV LHLEVFEDAG DMSISTSDDS SDNLNT