Gene PHATRDRAFT_40521 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_40521 
Symbol 
ID7198337 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011692 
Strand
Start bp143502 
End bp144113 
Gene Length612 bp 
Protein Length203 aa 
Translation table 
GC content57% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002184575 
Protein GI219128763 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCCTCG GCGATACCAG TTTTGCCCGT TACGACGACG AATTCCAGCG ACTCCAAGCG 
CAAATCCGCA GGTCGCTCGA AGAAGAACCG CCAAATCAGT ACACCCGGAA TCTGCTGCAG
CAATGCGACG ATCTTTTGCA GCAAATGGGC ATAGAAGCGC GTTCGGTCGG GGACGCCACG
ATGAAGCGCG ACTTGCTGCA CAAGGTCCGG ACGTACAAAT CGCAGTACCA ATCGTTGCAA
GCGCAGTCGG AGCGACAAGG ACTGATCGGG AGTACTACGA CCGGCAGCGA TCGTAATCAA
CAGGAGCGTA TGCGGCTACA GCAGAACGAA GACGCCCTGC ATTCGCAGAA CGAAACCCTC
GATCGGGCCC GACGGACGAT GCGGGAGACG GAATCGGTCG CCCTCGAAAT TACCGAAGAA
CTGGGCGCCA ACCGCGAAAA ACTCGTCGGT GCACATGGTA GAGTCCGGGA GATGTCGGGC
CTCACCGGCC GAGCCACGCG GATTTTACAG GCCATGAATC AACGAGCCAC GCAACAGAAA
CTCATCATGT ACGGTGTCGC GGTGGGACTC GTCTTGGCAT TTTTTGTCAT GCTATACAGA
ATCTGGCGTT GA
 
Protein sequence
MSLGDTSFAR YDDEFQRLQA QIRRSLEEEP PNQYTRNLLQ QCDDLLQQMG IEARSVGDAT 
MKRDLLHKVR TYKSQYQSLQ AQSERQGLIG STTTGSDRNQ QERMRLQQNE DALHSQNETL
DRARRTMRET ESVALEITEE LGANREKLVG AHGRVREMSG LTGRATRILQ AMNQRATQQK
LIMYGVAVGL VLAFFVMLYR IWR