Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_4048 |
Symbol | |
ID | 7198471 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011692 |
Strand | + |
Start bp | 393977 |
End bp | 394663 |
Gene Length | 687 bp |
Protein Length | 229 aa |
Translation table | |
GC content | 54% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002184536 |
Protein GI | 219128682 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.413268 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATACTAGCCC CCATGGTGGG AGCCAGTGAA CTTGCGTTTC GATTACTTTG TCGCAAATAC GGAGCTCAAG TTGCCTACAC ACCCATGATG AGTGCACCCA AATTCGCGAC GGATCCATCC TACCGATCGG CGGAATTTCA AACTTGTGCG GCCGATCGAC CCCTCGTGTG CCACTTTGCC GCCAACGACG CTGCGGATTT CGCGGCCGCT GCCATTGCCG CCCAGCCCTT TTGTGACGCA ATCGACTTAA ATCTGGGCTG TCCCCAACGA ACGGCCTATT TGGGGCACTT CGGTTCGTAT TTGCTCGATC GCAAAGATCG CAGTTTGATA TGCGACATTG TCCGAGCGGG AGCAGCGGCC GTGTCGATTC CTATTTTTGT CAAAATTCGT CTCCTGGATA AAGTGGAAGA AACGATCGAA CTTTGCCAGC AACTAGAGCG GGCGGGTGCC TCGCTCATTG CCGTTCACGC TCGGTACCGA GCGAGTTGGG AGCGGAAAGG AGCTGGCGCG AGAGATGGGC CCGCGTTGCT GGATCAAATC GCCGTTCTAA AACAGCACAT CACGTCTATA CCCATTATTG CCAACGGAAA CGTCATCACT TACGACGACG TCGAAAAAAA TCTTGAGTTG ACCGGAGCGG ACGGAGTGAT GAGTGCGGAA GGTATTCTAG ACAATCCGGC TCTGTTT
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Protein sequence | ILAPMVGASE LAFRLLCRKY GAQVAYTPMM SAPKFATDPS YRSAEFQTCA ADRPLVCHFA ANDAADFAAA AIAAQPFCDA IDLNLGCPQR TAYLGHFGSY LLDRKDRSLI CDIVRAGAAA VSIPIFVKIR LLDKVEETIE LCQQLERAGA SLIAVHARYR ASWERKGAGA RDGPALLDQI AVLKQHITSI PIIANGNVIT YDDVEKNLEL TGADGVMSAE GILDNPALF
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