Gene PHATRDRAFT_30660 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_30660 
Symbol 
ID7198389 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011692 
Strand
Start bp476096 
End bp477442 
Gene Length1347 bp 
Protein Length273 aa 
Translation table 
GC content48% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002184623 
Protein GI219128864 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.12339 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CATAAGTTTG TCGAAGACCA TATAGGTAAG TCCACCATGG CTTCTCTTGT ACAAGCGATC 
ATCCCTTCCA CAAGTCGTGT CTGAAAAGCC TGTGTATATC GTAACGCGCG GTGCACTTGT
TTGAAGGACC TTTAGCCGGT GTTGTTCGCC AAAGAAAGTA TGTACCACGG TGCACGTTTG
TACCTCTTAC CGGTTACTAA TTGCCATTGA CGTTCATATC GATCATGAGC CCCTTGGAAT
TGCTTTGTTT CATGCAAAAC GAAAAATCAA ACTTTCTCAT AAATTTCATA TTTGATCAGT
CATTCGCAGA CTTCGGTTAA ATTGTTGGAT TGCATAGCGA CTCTCCTTCG CCCGAAGTTT
TAGTTTTTGA ACCCGAGAGC CACCATGCCC CTTTCCACTG AGCGTAAAGC TGAATACTTT
GAGCGCTTGA AGTCGATGCT TACACAGTAC TCCAAAGCTT TTATCGTTGA AGTCGATAAT
GTCGGTTCCA AGCAGCTCCA GATGACTCGT CGCGGCCTCC GCGGAAAGGC AGAAGTCCTC
ATGGGAAAGA ACACCATGAT GCGCAAGTGC ATGAAAGAGT TCGTTGCCGA AAACCCGGGA
ACTCCTGTGG AAAAATTGAT TGAGACGTGC CGCGGTAATG TCGGCTTTGT TTTCACCAAC
GGAGATTTGG GTGAAATTCG CGAAGTTTTG GAGTCCAACA CTCGCCCCGC CCCGGCTCGT
GTCGGTTCCG TCGCCCCGAT CAATGTCGTC GTGCCTAAAG GTCCCACTGG ATGTGACCCT
GGCCAGACTG CCTTCTTCCA GACGCTTCAA ATTGCAACCA AAATTACCCG CGGTCAGATT
GAGATGGTCA ATGACACTGC CCTCATTCAG GCTGGAGATC GTGTCACTGC TTCGCAGGCT
GCTCTTCTTT TGAAGCTCGA TATTGAACCA TTTACCTATG GTTTGGTCCT CAAGAAGGTC
TACGATAATG GATCGCTTTT TGATGCCAAA ATTCTCGAGA TCACGGATGA TGTGTTGGCG
AGCAAGTTCG TGGGTGCCCT TAACATGATT GCCTCGCTCT CTTTGGCCAT GGGATTCCCT
ACCCAGGCAA GTGTTCCGCA CAGTATCGCT AACGCCTACA AAGCAATTTT GGCTGTCACT
ATCCAGCTTG AAAATTACAG CTTCGACAAA GCTGACCAAG TCAAGGAATA CCTAGCATCC
GAGTAAATTT TCGGAGCTGC CAAGGTGGAA GAGAAGCAAA ATGAGCTGAA ACTAATGGAG
GGGCTCGATT TATTAGATGC AGAAAACGGC ATTGGTGGCA ACATCTATGT TTCCTAACTG
ATAAGTACAA ACCCTACTTC CATGTGG
 
Protein sequence
MPLSTERKAE YFERLKSMLT QYSKAFIVEV DNVGSKQLQM TRRGLRGKAE VLMGKNTMMR 
KCMKEFVAEN PGTPVEKLIE TCRGNVGFVF TNGDLGEIRE VLESNTRPAP ARVGSVAPIN
VVVPKGPTGC DPGQTAFFQT LQIATKITRG QIEMVNDTAL IQAGDRVTAS QAALLLKLDI
EPFTYGLVLK KVYDNGSLFD AKILEITDDV LASKFVGALN MIASLSLAMG FPTQASVPHS
IANAYKAILA VTIQLENYSF DKADQVKEYL ASE