Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_23467 |
Symbol | |
ID | 7198449 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011692 |
Strand | + |
Start bp | 244018 |
End bp | 245646 |
Gene Length | 1629 bp |
Protein Length | 537 aa |
Translation table | |
GC content | 52% |
IMG OID | |
Product | dehydrogenase methylmalonate-semialdhyde dehydrogenase |
Protein accession | XP_002184508 |
Protein GI | 219128624 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CCCAGGCAAA GCACCATGAC GATAATCAGG CCCCTTCTGG CCGCAGTATC TGCAAACCGA TCTTTCACCC CCTCAAATTC AAAGAGATTC CTAGCTTGTC AGCCAAATGT CGCTGGAAAA TGGCTGAACG AAAAGGATGT CTACAACTAC TTCACCAACA ATGCGTTTGT GACGTCTTCT TCCAGCGATC GCCTGCCGGT TATCAACCCC GCCACGCAAC AGCTTTCAGG AAATATTGCA GAAAATACAG CCGACGAGTT CGATGAAGTC GTACTAAAGG CCGTTCACGC GTACGAAGAC TGGAAGCTGG TTCCCGTTCA GCAACGACAG AGAGTGATGT TGGAATATCA GCGTCTGATA CGTGATCGGA CCGCTGACCT GGCCGGCCTC ATTACGGCCG AAAACGGCAA GACGCTAGCG GACGCCAAAG GTGACGTGTT TCGGGGCCTC GAGGTTGTAG AATCTGCCTG CCAGGTAGCA CCTCAAATGC TTGGGGATTC CTTGGCGGGA GTTTCGAGTA CAGTCGATAC CGTCTCATTC CGAGAACCGC TTGGTGTCTG TACCGGTGTT TGCCCCTTCA ACTTTCCAGC CATGATTCCT TTATGGATGT TTCCACTGGC TGTGGCAAGC GGGAATTCGT TTATCTTGAA GCCGTCCGAA AAGACACCTA GTGCTAGCCT TCTACTGGCG GAGCTGGCGG CCGAAGCTGG CTTGCCAGAG AACGTCCTAC AAATTGTTCA CGGTGGGAAA GATACCGTGG ATCGCATTTG TAGCCACAAA GATATACAAG CGATTTCGTT TGTCGGGGGG AATTTCGCGG GAGAGTACAT TTTTCAACAA GGTACGGCAC ATGGTAAACG GGTGCAGTCC AACATGGGGG CCAAAAATCA CGCAGTCGTC CTGCCCGACG CCGACCGTGG TGCCACGGTA CGCGCTCTCG TGGGGGCAGC CTTTGGTGCC GCTGGTCAGC GCTGCATGGC CTTGTCGACG CTAATTCTTG TCGGAGAGGC CCAAGATTGG CTCAGTGATA TCGTTGAGGA AGCAGCCAAG CTCAGCGTAG GTGCAGGTTG GGAAGACGGA GTCGACGTGG GGCCATTGAT TACACACGAC GCCAAGAACC GAGTCTTGGA TATCATTCAT CGATCCATCG ACCAGGGAGC AGAGATCCCG TTAGACGGCC GTGACGTCCA CGTCAATGAA TATTCAACAG GAAATTTCCT TGGTCCAACG GTGTTGTCGA AGATCACACC TTCCAACATC GGCTACCAAG AAGAAATATT TGGACCCGTC TTGGCGTGTC TCGAGGCGAA AAGCTTGGAA GAGGCTATGC AAATTGTCAA TAGTAATCCA TACGGGAATG GATGCGCGAT ATTTACAGCT TCTGGCGCCG CGGCACGAAA GTTTACGAGA GAAATTCAGG CCGGCCAAGT TGGCATCAAT GTGCCGATCC CGGTACCGCT TCCAATGTTT TCCTTCACAG GCAACAAGGC CAGCATTCGT GGAGATCTAA ACTTTTACGG CAAATCTGGG GTTCAGTTCT ATACGCAATT GAAAACCGTG ACTAGCAACT GGCCGTACCG CTCGGCCGAT TTGGGGGGAA TGACTATGCC GACCATGGGT AAAGAATAA
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Protein sequence | MTIIRPLLAA VSANRSFTPS NSKRFLACQP NVAGKWLNEK DVYNYFTNNA FVTSSSSDRL PVINPATQQL SGNIAENTAD EFDEVVLKAV HAYEDWKLVP VQQRQRVMLE YQRLIRDRTA DLAGLITAEN GKTLADAKGD VFRGLEVVES ACQVAPQMLG DSLAGVSSTV DTVSFREPLG VCTGVCPFNF PAMIPLWMFP LAVASGNSFI LKPSEKTPSA SLLLAELAAE AGLPENVLQI VHGGKDTVDR ICSHKDIQAI SFVGGNFAGE YIFQQGTAHG KRVQSNMGAK NHAVVLPDAD RGATVRALVG AAFGAAGQRC MALSTLILVG EAQDWLSDIV EEAAKLSVGA GWEDGVDVGP LITHDAKNRV LDIIHRSIDQ GAEIPLDGRD VHVNEYSTGN FLGPTVLSKI TPSNIGYQEE IFGPVLACLE AKSLEEAMQI VNSNPYGNGC AIFTASGAAA RKFTREIQAG QVGINVPIPV PLPMFSFTGN KASIRGDLNF YGKSGVQFYT QLKTVTSNWP YRSADLGGMT MPTMGKE
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