Gene PHATRDRAFT_23444 details

Gene Information

• Locus tag: PHATRDRAFT_23444
• ID: 7198423
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011692
• Strand: +
• Start bp: 107359
• End bp: 110020
• Gene Length: 2662 bp
• Protein Length: 676 aa
• GC content: 52%
• Product: predicted protein
• Protein accession: XP_002184487
• Protein GI: 219128580

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.28731
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TGATTCTGTG TCACATCTCT GACTGGACAA TAATTCTAAA TTGATACGGT GTTTCCAAGA 
CAGTCTGGAG CGATTCTACA AATAGTCTGG ACCGAATGAG GAAGAATGCA ATTGCCTAAT 
TGTCAACGAT GACTGCCATT TCGTTGGATG TAGATGCATC CTGGATTCGT CTGGCCTGGT 
ACCGAAAGTA CGCACTCACA AGTGCGTGGT GCGCTTTGGA GCCGGCTTTC TCGCTGTTCT 
TCTGACCGCC ACCAGACCCG TTCGGCAATC GGCGTTTTTT TTCTTGTTTT TCGTTACACA 
TTTGTTCTTT GGGTTCCATC ATCCATCGCC CACACAAACA CATACACACA CGTATCCTGG 
ACAACGGACG ACAACCAAAA CTTCCAAGAA AGCCGAGACA TCTACCTATT ACCAAGAAGA 
TGTTACGGTG TATATCCAAC CTTACGGTAC TTGCGTTCCT TGTCGCGGGA GCTGTCGCCT 
TTGCTCCCGT CCATCGGCAG CCACGGGTCG CCCGTTTCGG GGTCGTATCG CCACCACCGC 
AGACGAAATG CTTTTTGTCG GCCGTCGCGG ACGCGCCGTC GGAAGCCGTT CCCGGTCAGT 
TTCCTGCAGA CAAGATCAGG TACGAACATG ATCGAGAAAA ACGACCAGCC AATGGCGGGC 
GGCTATAACG ATTGCCTTAC TCATTCCGGA ACAATCTTTC TCACGCGGAT GCGTTTCTAT 
TCCAATATGA CCGTCACAGA AATATCGCCG TCATCGCCCA CGTCGATCAC GGCAAAACAA 
CTTTGGTCGA TGCCTTGATT CGTCAGTCGG GTGTCTATCG CGATGCAGCG CAGAGCGAAG 
AAGCCGGAGA ACGTGTCATG GACAATCAGG ACCAGGAACG TGAACGCGGC ATCACTATCC 
TCGCCAAGAA CTTGGCCGTC AACTACAAGG GTACCAAGCT TAACATTCTC GATACTCCCG 
GACAGTAAGT GTGCTGTTTT CGGTTTCCTG GTCATTGATT CCCTTGTTCT TTCCGTGGGA 
CGACGATACT TACGATTCTC TTCTTTCTGC CTGCAGCGCT GACTTTGGCG GCGAAGTGGA 
ACGCGTTTTG AACATGGCCG ACGGAGTACT CCTCGTGGTC GACAGTGTCG AAGGTCCCAA 
ACCACAAACA CGCTTCGTTC TCGACAAGGC TTTGAAAAAG GGAATGAAGG CTTTGGTAGT 
CGTCAACAAG GTCGATCGAC CGGCTGCTCG TCCCGAGTAC GTTGTCGACA TGGTCTTTGA 
TCTTTTTGTC GAACTCGGTG CCACCGACGA GCAAACCGAT TTCCGTGTCG TTTACGCTTC 
CGGCCTGAAC GGACAAGCCG GTCACGAAGC GAATGGTTTG GAAGACACCA TGGGCCCTTT 
GCTCGATGCC GTTTTGGAAT CCATCGACCC GCCCAGGGTC GAAAAGACGG AACCGGAAGC 
GCTGCAGGCT TTGGTCAGCA ACATTGATTT TGATCCTTTC AAGGGGAAAA TGGGTATCGC 
TCGTATCAGT AACGGATCCA TCAAGTCTGG ACAAGCCGTC GCACTCGCAC ATCCAGACAA 
GGACAAGAAG ACCGGACGTG TCGGTAACTT GTTTGTCTTT GACAACTTGG GAAAAACCGA 
AGTTCCGGAA GCCAAGGCCG GCGAGATTAT CATGTTTGCC GGTCTCCAAG ATGTTGAAAT 
TGGAGACACG TTGATTACCA ACGAAAACAA TGGACAAAAC GCCGCTGGAC CACTAGAGCC 
GATTGCCGTC GAACAACCGA CGGTGCGAAT GACGATTGGT GTCAACAAGT CTCCTCTGGC 
GGGACGCGAA GGAAAGTTTT TGACGAGCCG CATGATTCGT GATCGTCTTT TCAAGGAATT 
GGACCGCAAC GTCGCGCTTC AGGTCGAAGA AACCGACTCG GCTGATCGTT ACCAGGTCTC 
TGGACGTGGA CAGCTCCATT TGACCGTGTT GATTGAAACC ATGCGTCGGG AAGGATTCGA 
ACTCGAAGTT GGACCACCCA CCGTCATTTA CAAGACCAAC CCCGAGTCCG GTAAAATTGA 
AGAGCCTTGG GAATCCGTTG AGGTCCGCGT TCCCGAGGAA TACGTTGGTG GTGTTGTCGA 
CTTGCTTAAT CAGCGTAAGG GAGAACTTTT GGACATGGGA ATTGAAGAAG GTGAAGGCTT 
AAGCGTCGTC AAGTACGTTG TCCCAACTCG GGGTATGCTG GGGCTACGGT CGGGTCTCCT 
TACCGCCACC CGAGGAACCG CCATCATTGA CAGTGTCTTT GATTCGTACC GCCCGAAGAT 
TGCCGGTGAA ATTCAGAGTC GTGACAAGGG ATCGCTGTTG GCCTTTGCGG ATGGCAAGGT 
CACTACCTTT GGAATTGAAG GTGCGCAGGA ACGTGGCCGC ATGATGGTCA ACGCCGGTGA 
CGACACGTAC AAGGGAATGA TTGTCGGTAT TCACCAGCGT CCAGGTGATT TGGAAGTCAA 
CGTGTGCAAG ACCAAGGCTT TGACCAACAT GCGGTCTGCG ACCAAGGGAA TCACAACCGG 
TATCACCGCG TCGGTAGAGC TTTCCTTGGA TGCTTCGGTC GAGTACTTGG CCGCGGACGA 
AATTTTGGAG GTGACCCCGT CTACCTTCCG CATGTCCAAG AATCCGGACA TGGCAAAAAA 
GAACAAGGGT GGCAAAAAGT AA 

 

Protein sequence

MLRCISNLTV LAFLVAGAVA FAPVHRQPRV ARFGVVSPPP QTKCFLSAVA DAPSEAVPGQ 
FPADKIRNIA VIAHVDHGKT TLVDALIRQS GVYRDAAQSE EAGERVMDNQ DQERERGITI 
LAKNLAVNYK GTKLNILDTP GHADFGGEVE RVLNMADGVL LVVDSVEGPK PQTRFVLDKA 
LKKGMKALVV VNKVDRPAAR PEYVVDMVFD LFVELGATDE QTDFRVVYAS GLNGQAGHEA 
NGLEDTMGPL LDAVLESIDP PRVEKTEPEA LQALVSNIDF DPFKGKMGIA RISNGSIKSG 
QAVALAHPDK DKKTGRVGNL FVFDNLGKTE VPEAKAGEII MFAGLQDVEI GDTLITNENN 
GQNAAGPLEP IAVEQPTVRM TIGVNKSPLA GREGKFLTSR MIRDRLFKEL DRNVALQVEE 
TDSADRYQVS GRGQLHLTVL IETMRREGFE LEVGPPTVIY KTNPESGKIE EPWESVEVRV 
PEEYVGGVVD LLNQRKGELL DMGIEEGEGL SVVKYVVPTR GMLGLRSGLL TATRGTAIID 
SVFDSYRPKI AGEIQSRDKG SLLAFADGKV TTFGIEGAQE RGRMMVNAGD DTYKGMIVGI 
HQRPGDLEVN VCKTKALTNM RSATKGITTG ITASVELSLD ASVEYLAADE ILEVTPSTFR 
MSKNPDMAKK NKGGKK