Gene PHATRDRAFT_16262 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_16262 
Symbol 
ID7198463 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011692 
Strand
Start bp351869 
End bp353371 
Gene Length1503 bp 
Protein Length479 aa 
Translation table 
GC content49% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002184529 
Protein GI219128668 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.201334 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GGATTTCATT TGCGGAGTTA TCAGTTGGAA GGTGTCAACT GGCTTCTGTT CAATTGGTGG 
AACAAGCGCT CGTGCATACT GGCTGACGAA ATGGGGTTGG GGAAAACAAT TCAGTCAGCG
GCCTTTCTAA GAGGGCTTCA ATCATTGCCG GCAACACAAG TACAGGGTCC CTTCCTGATT
GTGGCGCCGC TGTCTCTGGT AAATCAGTGG CAGTCCGAGT TGCGTTCTTG GGCACCGGAT
ATGAACGTTG TTTTGTACCA CGGTTCGGCG GACGCTCGAG ACTTTTTAGT GCAGCAAGAG
TTCTACTATA CGGATCAGTT TGTACCCAAG CCCACAGCGG TCAAATTGAA GAAGCTGAAC
GTTACCAAGT TCAGCGTTCT CATCACCACC TACGAAGTCG CACTTAAAGA CGTGGCCGTA
ATTTCAAAAA TTCGGTGGCG GGTATTGATT GTCGATGAAG CGCACCGACT CAAGAATTCG
AAAGCACGAC TGTTTGAAGA GTTGGCAATG GTGCCTCGAG AGCATTGCGT TCTGCTAACG
GGCACACCGA TCGCGAACGC CACCGAAGAG TTGTGGGCAC TTTTGCACTT TGCAAACCCG
TCCGTCTTTG ACGACAAGGA CTCCTTCCTG GAGAAGTTTG GGGAGATGAC GGATGCGGCT
CAAGTAAACG AGCTGCACAA TTTGCTCAAG CCGTATCTTC TTCGTCGCGT CAAAGAGGAT
GTTGAAAAGT CTTTGCCTCC GAAAGAAGAA ACAATCTTGG AGGTATCGTT GACCCCCATT
CAGAAGACTT TCTACAAGGC TATTTACGAG CGCAACACTT CCTTCCTTTT CAAGGGAACG
AAGCCCAGTA ATGCACCCAG TCTCATGAAT GTTATGATGG AGCTACGAAA GTGTTGCAAT
CACCCTTACC TTGTGAAGGG CGCCGAGGAT AGAATTTTGA ACGAAGCTGC CGCAAAAGTG
CAAAAGATGA TTGACAAGAA TGGGAATGAA GTCCCCATCG ACTACGGAAG CCTGTTTGGC
GAGCAGCTGG TCAAGTCATC GGGTAAGATG GTGTTAATGG AAAAGCTCCT CCAAAAGCTT
TTTGATGGCG GTCACAAAGT TCTGGTCTTC AGCCAGATGG TCCGCGTATT GGACTTACTT
GAAGAGCTTC TTAAACTGAA AAGGTACAAA TACGAACGGT TGGACGGCTC CACGACATCT
TCTGCACGTC TTTCTGCGGT GGATCGCTTC AATCGGAAAT CGTGCCAGCG TTTTGTTATG
CTGTTAAGTA CAAGGGCCGG TGGACTTGGG TTGAACCTGA CAGCTGCCGA TATTGTTATC
ATTTTCGATA GCGACTGGAA TCCTCAAAAC GACTTGCAAG CCATGGCTCG CGCTCACCGA
ATTGGGCAAA CGAGGGCCGT CCGCGTTTAT CGGCTTTTGA CAGCTAAAAC GTACGAGATG
CATATGTTTC ACAGTGCAAG CTTAAAGCTC GGTCTAGAAC GAGCCGTTCT CTCGCAAAAT
CGT
 
Protein sequence
GFHLRSYQLE GVNWLLFNWW NKRSCILADE MGLGKTIQSA AFLRGLQSLP ATQVQGPFLI 
VAPLSLVNQW QSELRSWAPD MNVVLYHGSA DARDFLVQQE FYYTDQFVPK PTAVKLKKLN
VTKFSVLITT YEVALKDVAV ISKIRWRVLI VDEAHRLKNS KARLFEELAM VPREHCVLLT
GTPIANATEE LWALLHFANP SVFDDKDSFL EKFGEMTDAA QVNELHNLLK PYLLRRVKED
VEKSLPPKEE TILEVSLTPI QKTFYKAIYE RNTSFLFKGT KPSNAPSLMN VMMELRKCCN
HPYLVKGAED RILNEAAAKQ LVKSSGKMVL MEKLLQKLFD GGHKVLVFSQ MVRVLDLLEE
LLKLKRYKYE RLDGSTTSSA RLSAVDRFNR KSCQRFVMLL STRAGGLGLN LTAADIVIIF
DSDWNPQNDL QAMARAHRIG QTRAVRVYRL LTAKTYEMHM FHSASLKLGL ERAVLSQNR