Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_16262 |
Symbol | |
ID | 7198463 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011692 |
Strand | + |
Start bp | 351869 |
End bp | 353371 |
Gene Length | 1503 bp |
Protein Length | 479 aa |
Translation table | |
GC content | 49% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002184529 |
Protein GI | 219128668 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.201334 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GGATTTCATT TGCGGAGTTA TCAGTTGGAA GGTGTCAACT GGCTTCTGTT CAATTGGTGG AACAAGCGCT CGTGCATACT GGCTGACGAA ATGGGGTTGG GGAAAACAAT TCAGTCAGCG GCCTTTCTAA GAGGGCTTCA ATCATTGCCG GCAACACAAG TACAGGGTCC CTTCCTGATT GTGGCGCCGC TGTCTCTGGT AAATCAGTGG CAGTCCGAGT TGCGTTCTTG GGCACCGGAT ATGAACGTTG TTTTGTACCA CGGTTCGGCG GACGCTCGAG ACTTTTTAGT GCAGCAAGAG TTCTACTATA CGGATCAGTT TGTACCCAAG CCCACAGCGG TCAAATTGAA GAAGCTGAAC GTTACCAAGT TCAGCGTTCT CATCACCACC TACGAAGTCG CACTTAAAGA CGTGGCCGTA ATTTCAAAAA TTCGGTGGCG GGTATTGATT GTCGATGAAG CGCACCGACT CAAGAATTCG AAAGCACGAC TGTTTGAAGA GTTGGCAATG GTGCCTCGAG AGCATTGCGT TCTGCTAACG GGCACACCGA TCGCGAACGC CACCGAAGAG TTGTGGGCAC TTTTGCACTT TGCAAACCCG TCCGTCTTTG ACGACAAGGA CTCCTTCCTG GAGAAGTTTG GGGAGATGAC GGATGCGGCT CAAGTAAACG AGCTGCACAA TTTGCTCAAG CCGTATCTTC TTCGTCGCGT CAAAGAGGAT GTTGAAAAGT CTTTGCCTCC GAAAGAAGAA ACAATCTTGG AGGTATCGTT GACCCCCATT CAGAAGACTT TCTACAAGGC TATTTACGAG CGCAACACTT CCTTCCTTTT CAAGGGAACG AAGCCCAGTA ATGCACCCAG TCTCATGAAT GTTATGATGG AGCTACGAAA GTGTTGCAAT CACCCTTACC TTGTGAAGGG CGCCGAGGAT AGAATTTTGA ACGAAGCTGC CGCAAAAGTG CAAAAGATGA TTGACAAGAA TGGGAATGAA GTCCCCATCG ACTACGGAAG CCTGTTTGGC GAGCAGCTGG TCAAGTCATC GGGTAAGATG GTGTTAATGG AAAAGCTCCT CCAAAAGCTT TTTGATGGCG GTCACAAAGT TCTGGTCTTC AGCCAGATGG TCCGCGTATT GGACTTACTT GAAGAGCTTC TTAAACTGAA AAGGTACAAA TACGAACGGT TGGACGGCTC CACGACATCT TCTGCACGTC TTTCTGCGGT GGATCGCTTC AATCGGAAAT CGTGCCAGCG TTTTGTTATG CTGTTAAGTA CAAGGGCCGG TGGACTTGGG TTGAACCTGA CAGCTGCCGA TATTGTTATC ATTTTCGATA GCGACTGGAA TCCTCAAAAC GACTTGCAAG CCATGGCTCG CGCTCACCGA ATTGGGCAAA CGAGGGCCGT CCGCGTTTAT CGGCTTTTGA CAGCTAAAAC GTACGAGATG CATATGTTTC ACAGTGCAAG CTTAAAGCTC GGTCTAGAAC GAGCCGTTCT CTCGCAAAAT CGT
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Protein sequence | GFHLRSYQLE GVNWLLFNWW NKRSCILADE MGLGKTIQSA AFLRGLQSLP ATQVQGPFLI VAPLSLVNQW QSELRSWAPD MNVVLYHGSA DARDFLVQQE FYYTDQFVPK PTAVKLKKLN VTKFSVLITT YEVALKDVAV ISKIRWRVLI VDEAHRLKNS KARLFEELAM VPREHCVLLT GTPIANATEE LWALLHFANP SVFDDKDSFL EKFGEMTDAA QVNELHNLLK PYLLRRVKED VEKSLPPKEE TILEVSLTPI QKTFYKAIYE RNTSFLFKGT KPSNAPSLMN VMMELRKCCN HPYLVKGAED RILNEAAAKQ LVKSSGKMVL MEKLLQKLFD GGHKVLVFSQ MVRVLDLLEE LLKLKRYKYE RLDGSTTSSA RLSAVDRFNR KSCQRFVMLL STRAGGLGLN LTAADIVIIF DSDWNPQNDL QAMARAHRIG QTRAVRVYRL LTAKTYEMHM FHSASLKLGL ERAVLSQNR
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