Gene PHATRDRAFT_16162 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_16162 
Symbol 
ID7198345 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011692 
Strand
Start bp194615 
End bp195921 
Gene Length1307 bp 
Protein Length284 aa 
Translation table 
GC content51% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002184584 
Protein GI219128782 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAATT TTCAAGGCGG CACCTGGCTC TTTGATGTGG GTGAATGTAC ACAGGTGAGT 
GCGCGATATT TACATCAGCA ACGGGCATAT CTACAGACAG CAAGCAAAGG AGGAAACACG
AGATGCTGGC ACCAGTCTGA GGCGCTAATA ATTGTTCTCG GCGTACGATG GTGATACTCA
TCTTTAACGA ATATCTGATA CTTGTATGAA CAACGGTCGA AATCATGCTT TATTCATCTT
CAATTGTCTC ACCCAAGGCG TTCTGCCTTC AACAGTTACA AATACAAAAG ACGTCGTCTA
TCAAACCAAG CAAAATCACG AAAATTTTTC TGACTCACGC CCACGGGGAT CATTCGTTCG
GACTACCGGG ACTTCTGTGT TTAATGGGGC AAGATCGCGA TCGGGAAAAT AGTCCACCAG
TCGAGATTTA CGGTCCCGAA GGCCTGCGCA TGTGGTTGCG TGTTGCCATT CGCTATTCTG
TCAGTCGGAT TGTTCCCCCC TATCGTGTCC ACGAAATTAT GGAAGTGCCC ATGGCCCCGG
AATGGGAATT CAACGGACGA TCACGGCGGT TTTACTACAA AGGTCGACGG AAAGGAAGCG
GTGAAGCATC CCGTTGGGGA AAGAAAGGAC TGGCGGGAGA GGATCCCACT AATTGGATCT
CCCAAGCAAA TATGCTGCAA CTCGAGGCAT CTTCATTGTA CGGAGAAATT GAGGGTGGAC
GTAATATATA TCCTCAATAC GACCATCCTC TTTGCGCCGA CGGCGCGCCT ATGTGGGAAA
TTGAAGACGA GGAAGACGTC AAAGTATACG CAGCACCCAT GAGTCACGGC ATTCCTTGCT
TGGGCTATGT TGTGGATGAG TTGCCACGTC CGGGTCGCTT ACGCAACGAG GTAGTTGAAC
CCATTGTCAA GCGTAATGTA CAAGCGCTAC GAGAAGCTGG TTTTACCGTT CCGATGAAGG
CTATGGCGGT ACTCAAGAAT TTACCACCCG GAAACGCGTT TACGTTCCCC GATGGTACCG
TCGTGCAGCA AGAAGACGCG GTCGAACCGC CACGGGAAGG CCGTAAAGTT GTGATTGGCG
GCGACACGGC CGATTGTAGG GCCTTACGCA ATCTTGCCCA GAACGCCGAC TTGGTAATAC
ACGAAGCCAC CAACTGTTAT CTCCAAGGAG TCGATAAGGA CACGGACGTA CGTGAAGTCA
CTCGAGATGC CGTGATGCAC GGGCATTCGA CACCACAGAT TGCCGGCGAC TTTGCCCGAT
CCGTCAACGC TAAGCGACTA GTCTTGAACC ACTTTTCGGC TAGGTAC
 
Protein sequence
MSNFQGGTWL FDVGECTQLQ IQKTSSIKPS KITKIFLTHA HGDHSFGLPG LLCLMGQDRD 
RENSPPVEIY GPEGLRMWLR VAIRYSGGRN IYPQYDHPLC ADGAPMWEIE DEEDVKVYAA
PMSHGIPCLG YVVDELPRPG RLRNEVVEPI VKRNVQALRE AGFTVPMKAM AVLKNLPPGN
AFTFPDGTVV QQEDAVEPPR EGRKVVIGGD TADCRALRNL AQNADLVIHE ATNCYLQGVD
KDTDVREVTR DAVMHGHSTP QIAGDFARSV NAKRLVLNHF SARY