Gene PHATRDRAFT_49572 details

Gene Information

• Locus tag: PHATRDRAFT_49572
• ID: 7198237
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011691
• Strand: +
• Start bp: 80036
• End bp: 83199
• Gene Length: 3164 bp
• Protein Length: 975 aa
• GC content: 50%
• Product: predicted protein
• Protein accession: XP_002184301
• Protein GI: 219128189

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.280952
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACGAAAC CCAAATCTTG CGTATCGTAC AGTGTCCTCT ATTACAAGCG GGCGGCCAAT 
ACAAAAAAGG TCTACCAACG CAAAGGCGTG ACAACGTTGG ACGGAGTCTT GACGATTCAT 
TCCGATTCCT CCAGGATTGT GTTGCGATCG GCGGATGGGG CAGATGTGCC GACACAGAAC 
GACGCGTTGA ATGCATGGAG TAAAGCGGCC AAGGCACCGG GAATGCTGGT ACTGTCCTCG 
GTCCAACGCG ACGTTGCACA GCAAACGTGG TCGGAAGACG ACGAATTTAC CGTGGGGCCG 
TATCGAATTG AAATCTTGAA GCGCCTGGAT CCGAACGAAA ACTGCAGCCC CGTCATCAAC 
AACATTGACA TTGTCCGAGG CCCGTCAGTC GTACACGGCC AGACAGTACG AACGGGAGTC 
CCAATGCAGG CTTTACCGTC CAGAACTCGA CTGCCGCTCA AACGCAAGGC TCTACCTTTG 
CAATCCACAT CCACTTTGTC TTTGGGGAAA CGAGTAATCG GCGCACTAGC TCGCAAGACA 
ATCCCTGCCA CAACTCCAGC AATAGGATCC ATAGCACAAT CTTGTGAACT AGTAAAGAGC 
GGAATAGCAA GCAAATGTAC GGTGGACAAG GGGACGTCTC GCACACTTCT GCCCACTGCG 
CGCCCATCCC CACCGACGAT GGTCCGCCGG ACTCCGCTGG TGTCCCGATC CAACACTACA 
ACCACAACCT CCCAAAGCAA TCTGAAGCGA CGCACGACGC CATTAATGGG GTTGAAATAC 
ACGTTGGCGA AAAATCGGGC CAAGCTGGCG TCGTGCCCGG CAACTCGTCG ATACCTACCG 
GGCGCAACCA GCACCTCAAC CATTCCCGCG ACAAACACAT CTCCTCCGCA ATCGTCCACC 
AATTTACTGG CGAACGTACC TCTACCTGCC TCGGTACGAT CCGTGCTTCG CCCTCATCAA 
GAAGAAGGAG TGGAATTTTT GTGGCAAGCA CTGGCACCAA TGGCCGTCTC CGGCAACGAG 
CAAAATGACA CCCAAAGTCC CGCAAGGGGC GCTATTTTGG CCGACGAAAT GGGTTTGGGG 
AAGACGCTCA TGACTATTGC CATCATTGCC GGTCTGCATC GTCGACAAAG AGACAAGGTG 
AGTCCAAACA GCAAAGCGTG GTGTCGTTTG TTCGTACTCG CATAGATGAC TCGCCATGCA 
GACAACGCCT TTGTCAGTCA AACCCTCACA GCTCTTGTGT TTTGGTTCGT TTCAGCAATT 
CATCGTGGTC TGCCCTTCTT CACTCGTTAC CAATTGGGCC AGGGAGTTTG ACAAGTGGAT 
CGGCCGGGCC AGTCAACCAA AACGTGTAGT CATTCAGAAA GGCGGCGAAG AGGGGGTCGC 
GGCTATGCGG GCGTACTGCG CTGGCATGTT GAAAAAGAAA AAGCAATTGC AGAAGATTGG 
TCAAGTATTG ATTGTCTCGT ATGATTTACT TCGGCGGCAG GTCGAGCATC TCCAAGATGC 
CTGTGCATTC GGTTTACTTG TCGTGGATGA AGGCCATCGT CTCAAAAATA CTTCCGGATC 
ATTGACCTTG ACGGCCTTGG AATCGCTGAC AGCTGATGCT CGCTTATGCA TTACAGCTAC 
GCCGATGCAA AACAATCTTT CCGAATTTTA CAATCTCGTC AACTTTGTTC GTCCTGACGT 
GCTCGGATCT CTCAACGAAT TCCGTGACAG TTTTGATCGG CCAATCTCTG CTGCCAATCA 
CAAGCACGCC ACACCGTCCC AAATTGCGAC GAGCCGGGAG CGATCAAGTG CCTTGGAGAC 
CCTAACCAAA CCCTTTATTT TGAGAAGACT ACAGGCGGAT GTATTGAAGA GCATGTTGCC 
ACCTCGAGTG GAAACTCTTT TATTTTGCCG GCCTTCGGAA ACTCAACGCG CTCTTTACCA 
CCAATTGACG GCTCGCATTT CGGGTGGCAG TTGTACCGAT GGCGGCACTG ACGCTCTCAA 
AACTCTGACA ACGCTGCGTA AAATCTGCAC ACATCCATCC ATCTGCAATG ATGACAATGT 
CAAACCATGG AATCGGCCAG AGAAAGGACC TTGCCTCAAG TATGACATTG CTCTGTCTGG 
AAAGATGACT GTGTTAGATA AGTTGCTGCA GTCGATTCGT GAGAACGCTC CGAATGACAA 
GATTGTGGTA GTTTCAAACT ACACTTCCGC CTTGACAATC GTGGAGTCCC TCATTCTCGG 
CCCACGTAAG CTTGGCTTTC TTCGTTTGGA CGGTGGTACC GAGTCATCAC AGCGACAGCC 
ACTCGTAGAG TCTTTCAATC GCTCTCATCC AGAGAAGGTT TTCTGTTTGC TCCTATCGTC 
CAAGGCCGGT GGCTGCGGTT TGAACTTGGT AGGCGCGAAT CGTCTCTTGT TGCTCGATCC 
AGATTGGAAC CCGGCCTCGG ACGTGCAGGC CATGGGACGC GTCTATCGAC AAGGCCAGAC 
GAAGCCGTGT TGGATCTATA GACTTTTTAC CACTGGCACC GTAGAAGAAG TCATTCTACA 
ACGCCAATTG CAGAAAGGAA ATTTAACAGC GTGGACAGTT GATGGTGGAA AGAGCTCACG 
ACAAAACAGC TCGGATTCTC GAGCTAAATT TTCAAAGGAA GAGTTGACTG CTGCATTCAC 
GCTCAAGGAC GAATATTGTA TCTGTGATAC AAAGCAAAAA ATGGGCCTCG CCTGGCCTGC 
GTACAATCGA GGGACCCTTT CGCAGTATGA CGATGCTCCT ATGAAGGAAA CGGCCATGTC 
CTTGTCCGAG ACTTTGAGTT TCGTACATGT AGTCAACGAC GATGCATGTG CAGAAGAAGA 
ACAGGACGCT GCTTTATCCA CTGCAAGCAG CACCCATTCT GCTTTGGTCA ATTTTTCATC 
TAACGAAGTG GTTTCTGATA CCAAACAAAG TAACTGCAAA AAACATTTGG AGGTCTTCCA 
TTGCGATGAT TCGTTGGCAG TGGGCGATAG TGATTCCGAA GAAGAATTCT GAATACTAGC 
TGCAAAATCA TCCTTGATAC TTGCTTGGCA AGTCTATCTG TACTTGGCCT CTTACATCGT 
CAACTCATTT TCTTGCGACA GCACTGTTTT CGAAAGATAA TGGGAGTTAA GATGGGTACC 
GTCACCTTTC ACAACTAATA TAGCTTGCAC TGTTATCTTT GTTG 

 

Protein sequence

MTKPKSCVSY SVLYYKRAAN TKKVYQRKGV TTLDGVLTIH SDSSRIVLRS ADGADVPTQN 
DALNAWSKAA KAPGMLVLSS VQRDVAQQTW SEDDEFTVGP YRIEILKRLD PNENCSPVIN 
NIDIVRGPSV VHGQTVRTGV PMQALPSRTR LPLKRKALPL QSTSTLSLGK RVIGALARKT 
IPATTPAIGS IAQSCELVKS GIASKCTVDK GTSRTLLPTA RPSPPTMVRR TPLVSRSNTT 
TTTSQSNLKR RTTPLMGLKY TLAKNRAKLA SCPATRRYLP GATSTSTIPA TNTSPPQSST 
NLLANVPLPA SVRSVLRPHQ EEGVEFLWQA LAPMAVSGNE QNDTQSPARG AILADEMGLG 
KTLMTIAIIA GLHRRQRDKT TPLSVKPSQL LCFGSFQQFI VVCPSSLVTN WAREFDKWIG 
RASQPKRVVI QKGGEEGVAA MRAYCAGMLK KKKQLQKIGQ VLIVSYDLLR RQVEHLQDAC 
AFGLLVVDEG HRLKNTSGSL TLTALESLTA DARLCITATP MQNNLSEFYN LVNFVRPDVL 
GSLNEFRDSF DRPISAANHK HATPSQIATS RERSSALETL TKPFILRRLQ ADVLKSMLPP 
RVETLLFCRP SETQRALYHQ LTARISGGSC TDGGTDALKT LTTLRKICTH PSICNDDNVK 
PWNRPEKGPC LKYDIALSGK MTVLDKLLQS IRENAPNDKI VVVSNYTSAL TIVESLILGP 
RKLGFLRLDG GTESSQRQPL VESFNRSHPE KVFCLLLSSK AGGCGLNLVG ANRLLLLDPD 
WNPASDVQAM GRVYRQGQTK PCWIYRLFTT GTVEEVILQR QLQKGNLTAW TVDGGKSSRQ 
NSSDSRAKFS KEELTAAFTL KDEYCICDTK QKMGLAWPAY NRGTLSQYDD APMKETAMSL 
SETLSFVHVV NDDACAEEEQ DAALSTASST HSALVNFSSN EVVSDTKQSN CKKHLEVFHC 
DDSLAVGDSD SEEEF