Gene PHATRDRAFT_49567 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_49567 
Symbol 
ID7198233 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011691 
Strand
Start bp67757 
End bp69587 
Gene Length1831 bp 
Protein Length345 aa 
Translation table 
GC content55% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002184297 
Protein GI219128181 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.157197 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ACAAGGCCAG CTTCTCACCC TCACCCTCAC ACGAGAACGA CGACAACGTC GAGAACCAAT 
GTCATATTCA GGAACCATTC CGCCTGCAAA GCATGGAGAG GAGAGAAGAT TCTCCTTGGG
GACCAATACC TCTGCGTTGG CGTTGCAGCG GTCTTCCTTT CCTGCTACCA AGCAGAAACT
CAGTAGTGCT CTCTATGGTG CCAGTGGCCT TTTAGGTGAG CAGATCCTTT CGTCTCACGG
TCCCTATGCC AGTAGCGGTA GCGAATTCCA CCAAGAAAGT ATGCGTCGGC AAAGCCAGTT
TGAGACGGAA TCTAACGCCT TTACGAGCAA TCCCGAACAG CCAAAAAGCT CAAAGAAGGC
AGACGGCGAG GGATCCCCTA CTCCACGTCA CCCCCCTCGC CGTGTGCCCG TTTTGCATGA
CTATCATGAC AACTATCGCG ATCCACTGAA CTTTCAAACC GTAAAGAAGG GCCCGGATAC
GGCCAACGTT GATGATTCTG CGGAGGGTCG GAAGGAGAGC AGGGCCGTTT TTCGTGGTGG
CGTTTCGGTC CATTTTCCGG AGCGTCTCTT TGAAATGCTG GAGCAAGTGG ATTTGATTGG
AATGGCTCAC GTTGTCTCGT GGCAGCCCCA CGGACGAGCC TTTCTCGTGC ATCGGCCGCA
AGAGTTTGTT GCGGAAGTTA TGCCACGGTA CGTACAATCA TACTACGACT ACAGCGGATT
TCAAAGATTA CTCACAGCAA ATTTGAACCC AGTTTCTTTC GTCAGAGCAA GTTTACATCG
TTTCAACGTC AATTGAATCT CTACGGATTT GTTCGTTTAA GTACGGGTCG AGACTGCGGA
AGCTACTATC ACGAATGCTT TCTCCAAGGC TGTCCTGCGC TATGCCGCCG GATTGTGCGC
CGCCGCATCA AAGGGAACGG AGTCAAGCCG GTGCCTTCGC CTTCCACCGA GCCGGATTTC
TACAACATGG AATGGTGCGA GGCGTCCGGT CCCAAAGCAA CGGAAGGGGA GCAGCCGAGA
CCGACAGTCC ATGCCAAAAC GAATCGTGAA CATTCTCAAT TCGTTCCGTG TGCCGCCACG
TCCACGTCCA CCGGTGGTTT CCACGGAATC CCCGATCACC ACGGCTACGC GTGGGCCGGT
CAGCGTCACC ACGGAGCGCC GGGTGCCGAC GCGCGATTCT TGAATTCCGA AGCGGCTTAC
ACGAATCCGA TGCTTGCGAA TCCCTGGGCT ACCTACTCGA TGACATCAGA AAGCCATCGT
TCGTTTGCTC CGCAGTTTTT CGGAAATTCC GGGGAGCACA TGGGCCATAC GGGTATGCTT
GGTTGGGATC CGTACGCGTC GGGCAGCAAC ACAGCTCCCT TTCGTTGGAA TTCGTCGTTC
CAGCCTCCGA GCGCTGCGGG GCGGGGTCTC GTGCGCGACC ACCCTTTGGA GGGGCGGTTG
GTGACGTTTG GTCGCGGGGA CTTGGACTAC TCGCGACGAT ATTCCGCCGG AGGTGGCGGT
CTGGACGGCG GCGAAGTGCG ATCGAACGTG CGGATGAGCA AACTACCGGA AGATCCGTAC
GCAGCGGAAG AAAACCCGTG GTCGTTGTTG TCCGACTTTG CGGCGTTGGA CGACGCGGCC
AACCAAGATC CAGTCAAGGA CTTTTGGTAC GGGAACCGGT AGACTTTGTC GGTCACGAAA
ATTACTAGGA AAAGGCTGGT GGAGCAATGG TAAAGAAAAA AGAAGCATTG GAATTTGAAT
GTGTCGCTGC CGATGTGTAA AATCGTTGAC TGTGAATTAA GTTATTTAGG TACATGGTCG
GCCCGAACCT AGTGCACCGA GCGCCAGTGT C
 
Protein sequence
MLEQVDLIGM AHVVSWQPHG RAFLVHRPQE FVAEVMPRKF EPSFFRQSKF TSFQRQLNLY 
GFVRLSTGRD CGSYYHECFL QGCPALCRRI VRRRIKGNGV KPVPSPSTEP DFYNMEWCEA
SGPKATEGEQ PRPTVHAKTN REHSQFVPCA ATSTSTGGFH GIPDHHGYAW AGQRHHGAPG
ADARFLNSEA AYTNPMLANP WATYSMTSES HRSFAPQFFG NSGEHMGHTG MLGWDPYASG
SNTAPFRWNS SFQPPSAAGR GLVRDHPLEG RLVTFGRGDL DYSRRYSAGG GGLDGGEVRS
NVRMSKLPED PYAAEENPWS LLSDFAALDD AANQDPVKDF WYGNR