| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_49559 |
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| Symbol | |
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| ID | 7198186 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011691 |
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| Strand | + |
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| Start bp | 41064 |
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| End bp | 42656 |
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| Gene Length | 1593 bp |
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| Protein Length | 391 aa |
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| Translation table | |
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| GC content | 48% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002184290 |
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| Protein GI | 219128167 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00273503 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GATATAATAT CTGCAGAAAT GAGATGCATT CCCGTCAGTG TATAAATGCT TGACAGTTAG
CATCTCTAAA AACGGCACAC GAGAGAACTT CGTCCTATGT GGCGGGATGA ACCACGCACA
CGAAATGCCT GTCTGTCGAA AGTGTACTGT GTGCCTACGT GAAACGGGAA TGCAGTGTCG
CGTGTTGACC ACTACCATTG AAACTGTCAA TCAAAACGCG CTCTTCACCC TCCATTCCAA
AACTTCTTTC GCCGCACACT GCAGGAATCG AGAAGTACCA TCATCGCCAG CGCCATGACA
ACTTCCCACT CACATCAGAT AGGACTGTCG GAAGAAATGA TCACCCATCT TCTCAACGGA
AACGGCAGCG ACTTGTCCTT TGGAGACGAT GATCTATCTT GGGGCGCTCT CACAAACGAT
GAACTCTTTG CCAACAATTC TCCGCATCCT TCAAAGTCGA CGATGACAGA AACTCCAGTG
CCACGCATGG TATCTGTCGA TAGCATGAGT CAAGTCCAGA CACATGGTTT TGAAGCAAAT
ATTGCCATGG TCTCTTCCAC TACACCGTAC GATTCTCTTA AGGACCTCGT GCAGCGTAAG
AAATTGATAT CGACTCTCCA GCGTTCGTCG CACTCCTCCA ACAGTCTCGT TTCCGCGAAC
TTGCCTATCG TGGGAAATCA AAACGCTTCC TTTCACGACG GTCCCGTATA TTGTTACAAT
CCTCAAGGCA CTTCACGCAT CGGTGCACCC AGCTTTTCGA AGATTCTTCG TCAATCCTCC
GGCATGACTG CAACAACGAT GGCAATATAC AAACAAGGTA TTGCCAACGC TCCAATCGAA
CCCATTTCGA AGCGTCGTAA GCTCGACAGT TCTATTAAAA ATCTTCCTCT ACATCAAGCA
TGCGTCGATG TCAAGCAGAA CGGAAAGCTT ATTCAAACGG CAGTACGTAA ACAGCCTTTG
CTCGCTTCCG TTCCCGCCAA AGCGATAACT AGCAAGTCCA TTTACGATTT CCAAACGTCA
CGTTTGGAGC GCAAGTCGGT GACTTCGACA TACCGTTACC CTTTGAATAT CGCTATTCAG
CACGATGCCG ACGTTACCAC AATTGAAGCC CTTTTGCGCG CCGCTCCTTT TGTTGTTACG
ACACCAGATG GCGGAGTTGC CCGCGAGTGT TCATTGCACG TTCTCCTGCG TCACAAAACA
CATGATCTTC AGTCGATCGA TTTGTGTTTG TTGCAAACTC CCAACGCCGT GTCGTGTATT
GATCGTCACG CCAATACTCC GTTGCACACC GCCTGTGCCA AGCACGCCTC CATTGATGTG
ATTCGGCATT TGACCGTTAT GTATCCCGAA GCGCTCGGTC TACGCAACTT TCACGGATAC
ACACCTCTCG AGATTGCCCA ACGTAGTCAA CATACCACGG ATGAGGTACT CGACTATCTG
TGGGATTCCG TTTCGCAACA GTTGTGCTAA CGACCTTTTG AAAGTGTGCA GGTTTCGTCT
TTTCAGGTTG CCTGAGCCTT ATTGAACACT GACTTGTTTG ACATGTATAG CGTATGTTGC
ATTTAAACTA AAGAATGGGA ATTTACATAC CCG
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| Protein sequence | MTTSHSHQIG LSEEMITHLL NGNGSDLSFG DDDLSWGALT NDELFANNSP HPSKSTMTET
PVPRMVSVDS MSQVQTHGFE ANIAMVSSTT PYDSLKDLVQ RKKLISTLQR SSHSSNSLVS
ANLPIVGNQN ASFHDGPVYC YNPQGTSRIG APSFSKILRQ SSGMTATTMA IYKQGIANAP
IEPISKRRKL DSSIKNLPLH QACVDVKQNG KLIQTAVRKQ PLLASVPAKA ITSKSIYDFQ
TSRLERKSVT STYRYPLNIA IQHDADVTTI EALLRAAPFV VTTPDGGVAR ECSLHVLLRH
KTHDLQSIDL CLLQTPNAVS CIDRHANTPL HTACAKHASI DVIRHLTVMY PEALGLRNFH
GYTPLEIAQR SQHTTDEVLD YLWDSVSQQL C
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