| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_49553 |
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| Symbol | |
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| ID | 7198224 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011691 |
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| Strand | - |
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| Start bp | 22397 |
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| End bp | 24343 |
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| Gene Length | 1947 bp |
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| Protein Length | 486 aa |
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| Translation table | |
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| GC content | 50% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002184381 |
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| Protein GI | 219128356 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTTTCCGGGA AACTAAGACA ACGGAGCAAC CATGGACCAT GGAGACGCAC CTCAGTCCAC
CTATAGCTAT TATACACATA AACTTTGTGA CCGCCTACGT GGATCAGTCT ACGCACTTCC
TTCATGTGGT TCAGGTCATA ACCCACGATC GCTTCGAATC GGACCCGATC CATCTTTTTC
GCTTCACGTC GGAGTCACCA CGAAGCGTTC GCAACCAGGG ACGTTGGCCT CCATGCGTGC
AAATTCCAAT ACTGGATAGC GGATGCTAGC AGTAACTTTG AACAGGAGTG CAAATAAAAC
AGTTTCGATT TAGATACGTG ACAAAGACGA CCATGAATGC GAAATACTGC TTCTTCTCGC
TCCGTAGTTG CGTTGTAGCT CTTTGCTTGC TATATGCTGT CAACTTGTCT GCCTCGCAGC
AGACTACACC TTCGCTGGCG TTGACAGCCT CCTCGTCGTT CTCCATGGTG TTGCAGCCCA
CCAAAGCCGA GCTAGGTTTT AACGCCCTGC AGGCTGTTGA AGAAGCCATT GCATCGACAC
TACTCATTCT GCAAGACGAA AATTTGTACT TGGACACAGA AGCTGTGATT CAACAAAGCG
ATTTTCTGGC GATGTCAGCA ACGCGACTGC GCTTCTTTGT AATTGTCACC ACCACCTCAA
TAGTGGATCC TGCAAGTGTG GAAACAGATG CGCTACGTGC AGAGCTTAAC ACTTTTATCC
AACAAGTCTT CCAGGACTCG ATGTTTGGAC GGAACTCCTT TCTGAGGGAA ATCCGCGCTA
GTCCAAGCGT GTTGCTTGCC AACGTCACAG ACTTGGTCGT CACACCCATT ATCCCATCGG
ATACTCCTCC TGGAGGCTCA ATAGCTTCAT CCGATAGTAG CACCAAGAAG CTCTCGTCAC
TCGACATCGC CTTGATTGTT GTTAGTGGAC TTATCTTTTT TGGCATTCTC TACATGATTC
TTCAACACCA CAAAGATCGT GGGTATATTG AAAACCAACG TCACCGAGCT TTCAACCACC
CTATGGCGGA AGCACTTGGT TCGCGACGCA AAGACTCGAA GTCTTACAAA CCCAACGATG
ATGATGCCGC TCCGTCCACA CCGAGTACAA TGACTTCTTC GGCCGACAAC GACGGTATGG
AATTCAATAC ATTGCCGGAG ACACCCGATA GATTGCGCAT GCAAATTTCC GCCCACACTC
CTCCTCCTAC TCTACGCCCC GGGCAAAAGT ACGTTGTGTT GAACGAAACC GTTCCACAGC
CCACGTGGAG AGACAACTCG GATTCGGCAT CGCAGGATTT AGCGGAAACA TTTGACAAGA
GTAGCTGGTT TGTCACGAGA AGTAACATCG ATAACATTCA AGAGGAAGAG CACAATTACG
AAGACAAAAG TGAGAAAGAG ACAACGCAGA TGGTACCAGG ATTGGTGGCT GATAATTACG
GAAAGCCGAC CTCTATCGAG GACGCCAACC CTTCCGATCT GGTCCACACC GACGATAGGC
GTTCTATCTC GGGTAACGAT ACGAGCCCAA GCAAAGATAC TTCCATAAAC GACGACGCGG
ACGATGAAGA TGACCCGTTT CAAGTCGGCC GTCTGATATC GTCGCCGCAT ACTACTGACA
CCGCGAGTAA GTCTAGTGCT AGTGTCGCTT CAACAGCTTC AGCCGTGTCG GAATGGATGC
GCTCGATTCG TGTAGTATCC TCCGATGCAC GCTCACCAAC AACGAGCGTT ACTTCCATCC
CTGAAGATAA GATTGCTGAA TCGTGCACTT CCATTTTGAA CGAGAACCCA GTCACAAGCG
GAACTCCAGT AGCCAGTCCA GTTGGCTTTG AAAAGACTTC GATAGCTAGC GACGAGTCGA
TCGCTCAGAC GAGTCTAGGA GCATCCAGCT TTTCACAAAA TAGTCTAGAG CAAAGTTTGG
AAAGTTCCGG TGTCACGCAC GGATCAG
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| Protein sequence | MNAKYCFFSL RSCVVALCLL YAVNLSASQQ TTPSLALTAS SSFSMVLQPT KAELGFNALQ
AVEEAIASTL LILQDENLYL DTEAVIQQSD FLAMSATRLR FFVIVTTTSI VDPASVETDA
LRAELNTFIQ QVFQDSMFGR NSFLREIRAS PSVLLANVTD LVVTPIIPSD TPPGGSIASS
DSSTKKLSSL DIALIVVSGL IFFGILYMIL QHHKDRGYIE NQRHRAFNHP MAEALGSRRK
DSKSYKPNDD DAAPSTPSTM TSSADNDGME FNTLPETPDR LRMQISAHTP PPTLRPGQKY
VVLNETVPQP TWRDNSDSAS QDLAETFDKS SWFVTRSNID NIQEEEHNYE DKSEKETTQM
VPGLVADNYG KPTSIEDANP SDLVHTDDRR SISGNDTSPS KDTSINDDAD DEDDPFQVGR
LISSPHTTDT ATSAVSEWMR SIRVVSSDAR SPTTSVTSIP EDKIAESCTS ILNENPLATS
RSLRRV
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