Gene PHATRDRAFT_49552 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_49552 
Symbol 
ID7198223 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011691 
Strand
Start bp21334 
End bp22255 
Gene Length922 bp 
Protein Length241 aa 
Translation table 
GC content53% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002184287 
Protein GI219128160 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGGCAG ATTCTCCCTT CTTGCTGCCT TTGAAAACCA TCGAAATTGT GGAACAGCTG 
AGGTTGATTC CGCACCCCGA AGGCGGCTTC TTTCTGGAAA CGCACCGCAG TGGGAGCGTA
CCCATGACCT CACGGGGTGG CACCGACCTC CAGAGTCCCT CCGCCGAGCA GCTCGTCACC
ACAGTCGGTC GTGAGTCGAA TCGCCAGGAC CAAGACCCCC GTCGTAACGC CCTGACGAGT
ATCTATTGGT TACCCACCAA GGCCTCGCCT CTGCTACTCT TGTGCGTCAA TCGATCCGAT
CACGTGCATT ATTATCACGG GGGCAAGCCC TTTGAATACT TACTCTTTCT GCCAAATCAC
GACACTTCCG TGCGCCGTGT TATTTTGGGT CCGGATTTAT CAGCCGGTCA TCAACTCCAA
GTCTGTGTTC AGGGTGGGAC CTACAAGTGT GGGCGTTTGC TGCGTGATGC CTATCCACAA
CAGCTACCGT ACGACTACAG TCTTGTGGGA GAGGCTGTGG GACCAGGATT TGATGTGGCT
GATTTCAGAC CACTGCAAAT CAGCGATTTG GAAGCGTGTG GAAATGACGG TGTCAAAACC
ACCCTGGCAC CATATCTTTA TAGCCATCAT CAACCCCCAG ATCCCAACCT TCACACCGCA
TTGGATTTTG ACGGTTTTTA CAATCAGGAC GAGACGCAAA AGGCTCGTTC TCAAGACCGC
ATTTAGAATA TCTGTACCAT CCCATCCCGC CTTGCCGTAA GCTGTTGGAG TCGATCGCAT
CTTCTCCGGT ACGCGTGCAA GTTCGTTTCC CATTCGCACC GCTTCTCTCC CTCGTTCTGT
ATCGCATAGA CGAGATGACG GCGAGCGCAC AAGAGTCTCA CATAGATAAT GCGTTTCGAA
GAGATTTTGC AATTGCTGTT CT
 
Protein sequence
MSADSPFLLP LKTIEIVEQL RLIPHPEGGF FLETHRSGSV PMTSRGGTDL QSPSAEQLVT 
TVGRESNRQD QDPRRNALTS IYWLPTKASP LLLLCVNRSD HVHYYHGGKP FEYLLFLPNH
DTSVRRVILG PDLSAGHQLQ VCVQGGTYKC GRLLRDAYPQ QLPYDYSLVG EAVGPGFDVA
DFRPLQISDL EACGNDGVKT TLAPYLYSHH QPPDPNLHTA LDFDGFYNQD ETQKARSQDR
I