Gene PHATRDRAFT_40470 details

Gene Information

• Locus tag: PHATRDRAFT_40470
• ID: 7198179
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011691
• Strand: -
• Start bp: 495235
• End bp: 496005
• Gene Length: 771 bp
• Protein Length: 256 aa
• GC content: 56%
• Product: predicted protein
• Protein accession: XP_002184470
• Protein GI: 219128542

Plasmid Coverage information

• Num covering plasmid clones: 34
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACAAGTC CTTATGGTAG CACATGGACG ACACGAGCGA GTGCTGCAGA TAACGACTGG 
AATGGTCTGA CGTACGGTGA TGGGATATTC GTCGCTGTTG CCAGCACGGG CCTTGGCAAC 
CGGGTCATGA CCAGTCCAGA CGGCATCGCG TGGGCTAGTC GACCGAGTGC TGCGGACAAT 
AATTGGACTG CAGTGGCGTA CGGTAATGGA ATGTTCGTCG CGGTTGCCGC ATCTGGTATT 
GGCGACCGTA TCATGACGAG TCCTGACGGC ATAACTTGGA CACTCAGAGG GAACGCCGTA 
GACAATGAGT GGCGAAGCGT AACGTATGGT GATGGGACGT TCGTCGCTGT AGCGAGTACC 
GGCATCGGGA ACCGGGTTAT GACGAGTCCC GACGGCATCC AGTGGACGAT TCAAACCAGC 
GCTGCCGACA ATTGGTGGTC TGCCGTCACG TATGGCGACG GGACGTTTGT TGCTGTTGCG 
GCAACCGGCA CTGGCGATCG GCTCATGACA AGTCCCGACG GGATCACATG GACGACTCAA 
ACAAGTGCCC CAGACATGGA TTGGCGCAGC GTGACGTATG GGGATGGGAT GTTCGTTGCC 
GTTGCGAGTA CCGGTATCGG CAACCGGGTC ATGACAAGTC CAGACAGCGT GACGTGGACA 
AGTCAAGCCA GTGCCAACGA CAATGACTGG CACTCCGTGA CTTATGGCAA TACGACATTC 
GTTGCCGTGT CAAAAACTGG AATCGGAAAC CGGGTCATGA CCAGTGGTTA A 

 

Protein sequence

MTSPYGSTWT TRASAADNDW NGLTYGDGIF VAVASTGLGN RVMTSPDGIA WASRPSAADN 
NWTAVAYGNG MFVAVAASGI GDRIMTSPDG ITWTLRGNAV DNEWRSVTYG DGTFVAVAST 
GIGNRVMTSP DGIQWTIQTS AADNWWSAVT YGDGTFVAVA ATGTGDRLMT SPDGITWTTQ 
TSAPDMDWRS VTYGDGMFVA VASTGIGNRV MTSPDSVTWT SQASANDNDW HSVTYGNTTF 
VAVSKTGIGN RVMTSG