Gene PHATRDRAFT_40416 details

Gene Information

• Locus tag: PHATRDRAFT_40416
• ID: 7198304
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011691
• Strand: +
• Start bp: 341072
• End bp: 343174
• Gene Length: 2103 bp
• Protein Length: 700 aa
• GC content: 48%
• Product: predicted protein
• Protein accession: XP_002184348
• Protein GI: 219128288

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.541093
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGGTCCA CGTACATTGT CTCCGTAATT CTTTGGACCG CAAGCGTAAC AGCTGTTGTG 
TGTACGGTTG GTATTTGCGC CGCGGAGGTA ACCTTCTGGA TTGGTCATGG TCTCGGAATT 
CCCTGGGATC GGGTCCCACT CGCTTGGTAT CGTTGGGAAG AATTCCAAAG CTTGATTTCC 
TCCAAGGCCG AAGAGGGGGC GCTCAAGGTG TGGATGGTTA TTATGGGACA AATGTCCTGG 
ACGATCTTGT TGAGCTTGTT TCCATTTCCT TGTCATAAAG GATCATCCCG TCGCCAACAA 
AAAGACCGAA TTACTGCCAC AACAAGCAGA CACCTGCCCG GTACCACAAG TGCGCCAAGT 
CCTGCTAGAG GATTTACTCA TTTACTCACC GCAAAGAAGA GCGTGGCCGC ACTTTTGACT 
ATTTACGGCA TATTAGTTCT CCTGCTACGA CCGTCTATTC CATACACAAG GCTTTCGACA 
ACACCCTTGC TTATGGTGTC ACTGGAAGTC ACAAAGGGCT TTCAACAGTA TCAAGAGTTG 
CTCCACGTAG CAAATAGCAA AGACGACTCA GGAGATCAAA ACAAGTGGTG GCGAGCTGAA 
GTTAACGCAA TGAAACAGCT TGTTCAAAGA GCCCCGTTCG AGCGTGACTA TACGGATGAG 
CCGATCAACG TTGTTCTGGT ATTTTTGGAA TCTGTTCGAG CAGATATGAT GCCGTTTGAT 
GGCTCTACAC CATGGGCGAG GCGATTTGTG CCCAATATCA CCATCCATGA CAAGATAACA 
CCATTTTACG ATCAATGGGT CAGAGACTCC AATTCAACAC TTTACGTTCC TCATATGAAA 
TCGGCTTCTG GTTTGACACA CAAAAGCCTT GCAAGTACGC TTTGCTCATT GCATGCCTTG 
CCTTTCCACG GCACCGTTGA GCATGCACAA AATCTTTATC ATCCCTGTCT TCCGCAGATA 
CTTGACCGAT TAGGGTATGA GAGTCAGTTT TTCAAATCCT TGACCGAAAC CTTTGACCAC 
CAAAACCACC TTATGCGAAA CATTGGATAC CCCAGAATGT ATGGGCGAGA GAGCTATGAT 
CGTGCGAACC ATCCAACCGC AGCATTCCAA CAAAACCACA CGGCCAATTA TTTTGGTTAT 
GAAGACATTG TGTTGCTGGA TCCTGTCACA GAATGGGTGG ATAGCCAGAC CAAACCCTTT 
TTCCTTTCGT ATCTGAGCGG TATCACACAT GATCCGTATG CCATTCCACC TTCTGGAGGG 
GGTTGGAAAC CACAATCGTT CAGTTTGGAT GAGAAAGTCA ACGGCTTTCT GAACGAAGTG 
TCCTACCTTG ACACGTGGCT AGATCTGTTG GTCAAGTCGT TTGAAGATCG CCATTTGATG 
AACTCAACTC TGTTTGTCTT TTTGGGAGAC CACGGCGGTC ACTTTAAGGA CCGAGATTCC 
CAGTTTACCA CATTCGAGCA AAATTACGAA GAGGCTTTTG ACGTCGGCGT TACGTTTCAC 
AGTCGCAATC CGCGTATCCA GAAGCTACTT CAAAAATCAC AGGCATTTGT GAGCGGCAAC 
TGGACTTCGC TCGACATTGC TCCGACTTTG CTAGAACTGC TCTTTGGAAG AGCAATAAAC 
CCAATGCGAC CAGGATCAGA GAAAGGATCG ATAAACAGTC CATATTCGAA GTACTTTGAT 
AGCCGCGCGA GCGCAAGCTG GGTCGACGGT CGGTCCATGC TACGCGAATC AGGCTCCCGA 
CTACGCTTGA GTATAGGTAA CCCTGGAGAG AGCTTGATGC TCCGAGATCA ATGTTTTGTG 
CTGGTCTTTC CTCTAAAAGA AGATGGCCGT GCTCACCCCG AAGTGTTCAA TATTTGTGCG 
GACCCGGGTC AGAATCAACC GTTGCAGCTT CTGCCAGTAT CGTCGTTCTC GATCCCAAAG 
TCGGAACTCG AAAGATGGGG CCGAAAAGCC ATGTCATTCT GTCTACAAGT CAAATCAGAT 
TTAGTACATG CTCACAAAAC GGGTATGCGT TGCCAAAAGT GCGCACTCGA GGAGTTGGTG 
ACATTGGAGA CTTTGGAGAG TTGGTCTCCC ACTGTTGGGG GGGACAAACG TATCCGACGA 
TAA 

 

Protein sequence

MRSTYIVSVI LWTASVTAVV CTVGICAAEV TFWIGHGLGI PWDRVPLAWY RWEEFQSLIS 
SKAEEGALKV WMVIMGQMSW TILLSLFPFP CHKGSSRRQQ KDRITATTSR HLPGTTSAPS 
PARGFTHLLT AKKSVAALLT IYGILVLLLR PSIPYTRLST TPLLMVSLEV TKGFQQYQEL 
LHVANSKDDS GDQNKWWRAE VNAMKQLVQR APFERDYTDE PINVVLVFLE SVRADMMPFD 
GSTPWARRFV PNITIHDKIT PFYDQWVRDS NSTLYVPHMK SASGLTHKSL ASTLCSLHAL 
PFHGTVEHAQ NLYHPCLPQI LDRLGYESQF FKSLTETFDH QNHLMRNIGY PRMYGRESYD 
RANHPTAAFQ QNHTANYFGY EDIVLLDPVT EWVDSQTKPF FLSYLSGITH DPYAIPPSGG 
GWKPQSFSLD EKVNGFLNEV SYLDTWLDLL VKSFEDRHLM NSTLFVFLGD HGGHFKDRDS 
QFTTFEQNYE EAFDVGVTFH SRNPRIQKLL QKSQAFVSGN WTSLDIAPTL LELLFGRAIN 
PMRPGSEKGS INSPYSKYFD SRASASWVDG RSMLRESGSR LRLSIGNPGE SLMLRDQCFV 
LVFPLKEDGR AHPEVFNICA DPGQNQPLQL LPVSSFSIPK SELERWGRKA MSFCLQVKSD 
LVHAHKTGMR CQKCALEELV TLETLESWSP TVGGDKRIRR