Gene PHATRDRAFT_40382 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_40382 
Symbol 
ID7198268 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011691 
Strand
Start bp252158 
End bp253006 
Gene Length849 bp 
Protein Length282 aa 
Translation table 
GC content47% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002184332 
Protein GI219128254 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0235431 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGTATC ACCGACTATT ACAACCTGAT TCCGGCATCA TTGACGGCTC CGTATGTTCA 
CTGTCAGAGC TTGAGGAGAG CCTCACATTG CATCTGATGT GGCGACTTCA GTTTACCTTG
TTTTTGGAAC TTTTGCACTT GACCACACCG GCCTACCTGT CTCTCAACTT GTATTCTCAA
GCGTTGACGA TTCCAAGACA TCGGAGAGCC GTTGAGAGCA ACGCATCCAG AAATGTGCGC
TTGACCACGG GCCTTTCTCT TAAGGGATCT GAAGGGACGG CGAAGGAAGT TGCAATCTAC
CAAGGAAAAG TCATTCGCGT TGCTGCAAAA AAATTTGAGC TGGACGGATC AAAGCCGTCC
TCTAAGTATT ACACTACGCG CAAAAAGGCA AGAGAACGTC TTTTTGTTTC CGAAGACGGG
GTAATAAATG ACTACAACCA TTACCGCACA ACAGCGCTCA AGAGTTCAGG CGACCGGGCC
TTATCCATCC TAACATACGA TGTCATGAAC CTTCTAAGAG CTCATCAATA TCCAGTGGAG
GATGGAGACT TGGGGGAGAA CATACTGGTG GATGGGGTCA CGTTCGATTT TTTTGAGCCC
GGACGAAGAT ATCAATTTGG TGAAGAAAAT GGAGTTGTAG CAGAAATCGT TGAACACATG
ATGCCGTGCG CAAATCTATG TAAACTTCCC TACATAAACG ATGAGAGGAT GGAACCAGTA
GAGCGAATCG AGAAATGCAA AGCTTTGCTG AATATTCTGA ATCAGGATGT TGGTCTTCGA
GGCTGGTATG CTCGGGTCGT TCAAGAGGGA AGTATTGCAG CAAGGTCGGC TGTGGTAAGA
CTGAAGTGA
 
Protein sequence
MLYHRLLQPD SGIIDGSVCS LSELEESLTL HLMWRLQFTL FLELLHLTTP AYLSLNLYSQ 
ALTIPRHRRA VESNASRNVR LTTGLSLKGS EGTAKEVAIY QGKVIRVAAK KFELDGSKPS
SKYYTTRKKA RERLFVSEDG VINDYNHYRT TALKSSGDRA LSILTYDVMN LLRAHQYPVE
DGDLGENILV DGVTFDFFEP GRRYQFGEEN GVVAEIVEHM MPCANLCKLP YINDERMEPV
ERIEKCKALL NILNQDVGLR GWYARVVQEG SIAARSAVVR LK