Gene PHATRDRAFT_40378 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_40378 
Symbol 
ID7198267 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011691 
Strand
Start bp242886 
End bp243371 
Gene Length486 bp 
Protein Length161 aa 
Translation table 
GC content47% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002184427 
Protein GI219128452 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTGGCC AGGCTAATTT AGCAAGTGAA AAAACGAGCG GGATAGCAAC AACGACCTCT 
AAAAAGCCGG TGCCGAAATT TGGTACACTA GAACGACCCA AGGCTACTGA AGACGACGGA
AAATTGAAAA ATGTTGGCAT CAAGGCGGGG GTTCCGTTTG TGCTGTTTTC AGTCTTAGCA
GCGTGGGTCG TGAGCAACGC CTTGGACGGG AAACTCAAAG AGATGGAGGT TTCACAGGGA
AAATCTTCCA AAAGCTTGCG GCAAGCGAAA TTGGAAGTGG AACATGACGA AATGCTGGAG
CGCCTCAACA AAATTGTGGC CAAGGACTTT GACAATACAA AACGAATAAA GCGACCACAG
GAGGTTCTGG AAGAGCGCAG GTTGGAACGA GAACGACGTA ATCGATGGTA TCGGCGTCTA
TATCGCTGGG TGATGAGAAT CCCAGAGGAA GCTGAACTTA ACGTCAATAA AAATTCGCGA
AAATAA
 
Protein sequence
MSGQANLASE KTSGIATTTS KKPVPKFGTL ERPKATEDDG KLKNVGIKAG VPFVLFSVLA 
AWVVSNALDG KLKEMEVSQG KSSKSLRQAK LEVEHDEMLE RLNKIVAKDF DNTKRIKRPQ
EVLEERRLER ERRNRWYRRL YRWVMRIPEE AELNVNKNSR K