Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_40369 |
Symbol | |
ID | 7198261 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011691 |
Strand | + |
Start bp | 224825 |
End bp | 225724 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | |
GC content | 52% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002184325 |
Protein GI | 219128240 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCAAGAA TACCCAATGG TGGGGACATT GGCAACTTAC CAACACTTGA TCTCCACGGA TTCCGTCGAG AACGAGCAGT TCGAGATACA GTCGCCTTTC TAGAAATCCA TCAGACTTCC TGGGTAATTG TTATTACCGG AAGCGGAAGG CACTCGCCGG AAGGTCCGGT GTTAAGGGGT GCAGTGGAAA GCATTTTACA ACGCCGGGGT ATGCAGTTTT CACGGAATAC CCCTGGTACC TTCTTGGTCA ACGCGGCGAC GGGACACTCA AATTACTATT ACCAAGACGG TTGCGCAGAG GACACCAAAG TTGTGGTACG TGATGCCAAT GAAGAGGAGG TGGCGGTGCA GTTGGCCATG CGGAAGACAA CCCGTGGCTA TTGTGGAACC GCTAGTGGTC GAGCGCTTCA CCGCTCATCG TCGAGCTCGG GCAGTAGTGA AAACTGTTTG GGAACGGGTC CTTCGCTCGT AGAAGTGGCG AGGGCCGATC AAGAGCTTGA TCAAGCACGA GCAGAATCTC TCCAACTGGT ACGTGAGGAA GCCAGCAAAT ATAAGAGGGA AGCCAAAGCG ATACGGAAAG CCGTGGCCAA GTCCATCGAC GAAGTACGAA AGTATGAGGA CGAAGAGGAA GAGTTACTCC GGAAGGCTGT ACAACTATCG GAGGAGCAGG AAGCTAGTGA GCGGGAAGAG GAGGAGAGAA TTCTCCGAGA AGTTCTCCGA GAGTCGGAAA AGGACTCGAA GAGTTCGTGT CATAGTGACG ACGCTTTGCG TGAAGCAATT CTTAGATCTG ACTGTGAATA CAACCCACTT GCGTCTGATG ACAGCGATGA GGCCAGCATG ATACGGCAGG CAATTGCTCT GAGTCTGGCT GACTTCCACT CCGCTGTCCT TCCTGAATAA
|
Protein sequence | MSRIPNGGDI GNLPTLDLHG FRRERAVRDT VAFLEIHQTS WVIVITGSGR HSPEGPVLRG AVESILQRRG MQFSRNTPGT FLVNAATGHS NYYYQDGCAE DTKVVVRDAN EEEVAVQLAM RKTTRGYCGT ASGRALHRSS SSSGSSENCL GTGPSLVEVA RADQELDQAR AESLQLVREE ASKYKREAKA IRKAVAKSID EVRKYEDEEE ELLRKAVQLS EEQEASEREE EERILREVLR ESEKDSKSSC HSDDALREAI LRSDCEYNPL ASDDSDEASM IRQAIALSLA DFHSAVLPE
|
| |