| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_40362 |
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| Symbol | |
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| ID | 7198279 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011691 |
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| Strand | + |
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| Start bp | 211951 |
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| End bp | 213636 |
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| Gene Length | 1686 bp |
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| Protein Length | 561 aa |
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| Translation table | |
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| GC content | 54% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002184322 |
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| Protein GI | 219128233 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0281204 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTACTT ATTTCGTTGC CTTTGCGTTC ATCATCTGGA CTTTGGCGTT ATGGCGACAC
GTCTCGCGTC GGGCGGCATT CATCAGCGAC CCAGACCGGC GTCTCCCGTC CCCTCTCTGG
CACGTCCCCG TTGCTTCGTC CCACGGGGAC CACAACGACC CAATGACTAC ACCCACCAAC
GTCAGTCGTA CGGTCGAGTC GTTGCTCTCG TTGCGCGTCG GAGACTTGCC TGGCTACACC
GGATGGGCCC GGCCCGTCGG AACACTGTCA CCGTACTTTC GACAAGTATC CGACGCCCAC
GGCCGTCCCA CTCGAACCAT CGTTACGGTG GGACGCGTCT GGACCGTACG AGTGGCGTGT
ACGGGACACG TACGGTGTTT CCGTCCCCAA CGGGCCATTC TGGACGTACG TGCGTACGGG
CCCAGTGTCG TGGCCGGAAT GGTCGTGCCG TCCCGTGTCC GCCGGGCCTA CGACCCATCC
AACACCACCG CCAGTCACGA CACGATTCCG GGATATTACG ATGTGCAAAT TGTCTTTCCC
GATGCCGGAG TCTACCACGT CGAAGTAGTC CTGGCCTTTT CCAACGCACC GGCGTGGAAC
GAATTTCCAC TGGCTGGACC CGAACCCGAC TACGAAGGCT ACCTTCTACC AGATTTCCCC
TTAACCGTGG TTGTCGATCC CGTAGAACTA GTCAGCGAAG ATCCTACGAC GCACGCGAGT
CAAGACAATC GACCAGTATG TACAAACGCA GACTTGCTCG AAACGTCGCC AACCAGTGCA
ATAATCAAAG GTCGTTGGAG AGTGTCCGAC AAGGTTCAGG ACCGACGCTT GGTCGAAGAT
GCGTACGAGA TTGATCACAG TCCATCCAAC ATTAGCCGAA CAGGATATGA GCAGGGCGTC
AATTCGCTGG GTATTACTAT GGCCTTTGAA TACCAAAAGT GTAAACTCGC GACTGTTCAC
CAAAGTAAGC GGATCTTGAT GGTGCCGAAA ACGAAGGATT GGTACATTCT GTTCGTTGGT
GACTCCAACA TGCGGGCACA GCATTTGACC TTTCAATCTT GGCACGGTCG CGATCGGAAT
CAATATCCCC AAAGTGGCTA CATTTCGACT GCCAAGGGTC TCGCAAAGCA GCTACCCCAA
ATTAGAGAAA AACTGAGTGC TTTGAAGAAG CACGCCACTA ATCGGACCGA GTTTTACGTC
CTGTTCAATG CCGGCTTGCA CGACATTGCG CGCCTCTGTA GTCGAAAGTG GTCCCATGAG
AGATTTAACA ACGGTGACAC CCGACCTTGC GTGGAACAGT ATCGGCAGCA TCTAGGCGAG
CTGATCAATG GCATCAAGGA CCTCTCACCC AAGCTTGCCG TTCTGCAAAC AACCATTGCT
GGTTGGCCCA AATGGGGCAA TTTTGGTTTT GCGTGGCCGC CATCTCAAGG ACAACCATTG
CCCTTCCACT CGTCCACATG CCAATCCTTT AATGAGATTG CCTGGGAAGA GGCAACGAAA
GCGGATATCT CTGTGATGGA TGCGTATTGG TTGACCGTGC CTCGGCCAGA TCATCGACAA
GTCGATAACG AAAATGCGAT TGGAAAGCAC ATGGTACACG TTGGACCAGA GATACACAGC
GTTATGCAGC GCAAGTGGAT TTCCTTGATT GAGATTGCCT TGGGAAACGA CAACCCAGTC
ATGTGA
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| Protein sequence | MSTYFVAFAF IIWTLALWRH VSRRAAFISD PDRRLPSPLW HVPVASSHGD HNDPMTTPTN
VSRTVESLLS LRVGDLPGYT GWARPVGTLS PYFRQVSDAH GRPTRTIVTV GRVWTVRVAC
TGHVRCFRPQ RAILDVRAYG PSVVAGMVVP SRVRRAYDPS NTTASHDTIP GYYDVQIVFP
DAGVYHVEVV LAFSNAPAWN EFPLAGPEPD YEGYLLPDFP LTVVVDPVEL VSEDPTTHAS
QDNRPVCTNA DLLETSPTSA IIKGRWRVSD KVQDRRLVED AYEIDHSPSN ISRTGYEQGV
NSLGITMAFE YQKCKLATVH QSKRILMVPK TKDWYILFVG DSNMRAQHLT FQSWHGRDRN
QYPQSGYIST AKGLAKQLPQ IREKLSALKK HATNRTEFYV LFNAGLHDIA RLCSRKWSHE
RFNNGDTRPC VEQYRQHLGE LINGIKDLSP KLAVLQTTIA GWPKWGNFGF AWPPSQGQPL
PFHSSTCQSF NEIAWEEATK ADISVMDAYW LTVPRPDHRQ VDNENAIGKH MVHVGPEIHS
VMQRKWISLI EIALGNDNPV M
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