Gene PHATRDRAFT_40338 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_40338 
Symbol 
ID7198207 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011691 
Strand
Start bp150864 
End bp151520 
Gene Length657 bp 
Protein Length218 aa 
Translation table 
GC content52% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002184406 
Protein GI219128409 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.00203179 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGTCGC AATTGATATG GCAGCGTTGG GAAAAGCGAG CGTTGTACGT CACCGATGAG 
CTCCAGAAGG CGAAAAACGT GGAGGCAAAA GACCGCGCTC GCCGTACGAA TGAACGCAGC
CAGCTGTTGA AAGTCCTGGG GGGTCGTCAA TCGGAGTGGC GAACGAAACG ATTGGGATTT
CAGTCGAGCC AGGCACCATC TCTTGCGGTG TACAGAGAAA TATGCAAGAC TGTCTTCGTC
GAAGCAGGTA TATTTGTACC CGCATTTGCG CAGAATCAAC AGGCACACTT GTGTCGACAC
ATCCATTGGA TGACGGCAGA AGACAACCAG TTAACGTATC TGAAACGAGA CTGTCTCGAC
TTGGCCCATT CGTTGGAAAA GACTGTCCGA ATTCTTCGAG AGGAGTGCAC AGAGATTGAG
ATTCGCTACT TGAATCGAAT ATTTCTGATT GAGCGGGAAA TTCGTGAATT GCAGTCGAAG
CTCAGCGAGT ACCCGTTGAT TGACGCGTCT CGGTACGGTT GTGACAAGAG AGAGTGTGAC
CGCGCTGCTC CCGCCTGTGT GCATTCGGGC GTAACACTCG AGACTTTGAG TCTCCACGGT
AGCAGCTGTT CGTCGTTGCG TACGGATATG TCGTCCAGCG ACGAGGACTC GGATTGA
 
Protein sequence
MASQLIWQRW EKRALYVTDE LQKAKNVEAK DRARRTNERS QLLKVLGGRQ SEWRTKRLGF 
QSSQAPSLAV YREICKTVFV EAGIFVPAFA QNQQAHLCRH IHWMTAEDNQ LTYLKRDCLD
LAHSLEKTVR ILREECTEIE IRYLNRIFLI EREIRELQSK LSEYPLIDAS RYGCDKRECD
RAAPACVHSG VTLETLSLHG SSCSSLRTDM SSSDEDSD