Gene PHATRDRAFT_40322 details

Gene Information

• Locus tag: PHATRDRAFT_40322
• ID: 7198200
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011691
• Strand: +
• Start bp: 106517
• End bp: 107284
• Gene Length: 768 bp
• Protein Length: 255 aa
• GC content: 53%
• Product: predicted protein
• Protein accession: XP_002184304
• Protein GI: 219128196

Plasmid Coverage information

• Num covering plasmid clones: 32
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACTTTCT CTGCCATTAG CAACAAATCT ACCCCCTTGA CTAACGGGAC AGCTGCTCAG 
AGTCCCACGG TGGTTAGGAA TACCGACAGT GATCAAGAGC GATCGCAACA ATCCTCGACA 
ATCTCTCCGG TCCCCGCCGA TGAAGAAGTG ACATCTCAGA CGAGTCTATC CAACGCACCG 
TTTTTGGCTG ACGAGGCTTT GGACTTCTCC GGTGTGCCTC TCAAGACAGC CAGCAAAAAG 
ATGGTACGCT TCGACTGCGT GGCCAGCAGT GCCAACGATG ATTGCGTTAG AAGAAATGGC 
TTGACGGGAG AACAAGATGA CCAGGATCAC ATGGAGGAAG AATTGGAACA TCAAGGCAAC 
GACTCATCCC GTTCTCAAAA TTGCAGTATT CCCAAGACAA AAAGCAAGCG CTCCTTGCAA 
CAGGCCCAGG TTCTTCTGCA GAGAGTGTCT CGCGGCAGCA TTGCCCGTCG CCGTAAGAGT 
CCACCACCCG CCAACATGAC GGCCCTCGAC TGTATCAAGC TTCAACTGGA TCGGATGGAA 
GCAAAAATAC AGAAATCGGC CGTGTTGGAA CTCGCCTTGT TGAATCAATC CAAGACTATT 
CGTGAACAGC GGACGGCCTA CCAGAGAAGG TACGAGAAAA TGGCCCGGGA CTATGGTGAA 
CTCGTCCAAG CAGCGCATCC CGATCAGAAG CACGTGGTAC AGCCTGGTAT GCCGCACGAG 
TTACCGCCCA CATTTCCCGG GAATCGCGCT ACCATGAAGT CCACGTAA 

 

Protein sequence

MTFSAISNKS TPLTNGTAAQ SPTVVRNTDS DQERSQQSST ISPVPADEEV TSQTSLSNAP 
FLADEALDFS GVPLKTASKK MVRFDCVASS ANDDCVRRNG LTGEQDDQDH MEEELEHQGN 
DSSRSQNCSI PKTKSKRSLQ QAQVLLQRVS RGSIARRRKS PPPANMTALD CIKLQLDRME 
AKIQKSAVLE LALLNQSKTI REQRTAYQRR YEKMARDYGE LVQAAHPDQK HVVQPGMPHE 
LPPTFPGNRA TMKST