| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_40315 |
|---|
| Symbol | |
|---|
| ID | 7198194 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011691 |
|---|
| Strand | - |
|---|
| Start bp | 93848 |
|---|
| End bp | 94680 |
|---|
| Gene Length | 833 bp |
|---|
| Protein Length | 219 aa |
|---|
| Translation table | |
|---|
| GC content | 49% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002184393 |
|---|
| Protein GI | 219128382 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.0454468 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCCCTCA CCGACCCGGG GAAAAAATGC ACAGTAGGTC GTCCTTCTGA AAGGAAGAGA
AACGTCCGAG CCACTTTTGG TAAACACTTA CGACAAAGAG ATGTCAACCT GGAGTATATT
ACGCCATCTA ATGTTGCTTA TGTGGATCGC AGGGATGGCC TCGTACACCG TGGCCTTCGT
CACTCCACTG GCCTCTTCCT TGGCTTTCCA GAGATCGAGA ACTGCGGTAA TGTGGGAGTC
AACGAATCCA GCGACGGAGG ATCCTCACGT AACAAAAATA CTCTTTGTGG AATGCGGTAT
GTATGCATGT TTTGGTGTAA AAACAGGCCC GTAGCATCCC TTTTCTTTGC TGTATACCAT
CCAGTCTTAC GGATCGAGAT GTGTGCTTTT CACTAGGTTT CGGGGCGGAT GCGCACGGTC
AGAATTCAAC CAAAGCGGCA GGTAAGACAG ACAGAAAGTT ACCGGTCAAG CGCGCAGATC
AATGAGACTA GTCGGAACTG GTATTGAGAG AAGTCTGTCT TACCGCGCGC TTCTCTCGTG
TGGCAGTACG TGCTTGTCGG AACGCCATTG AATTTAATCA GATTCCATCT ATTTCCGATA
TTGTCCCGGG TGGACGGGAC AACATGAAAC TGGACGTACT TCTGGCTGTA CCGCTTACTT
ATCAGGACGG CTTGGATTTG AATGTGATCC GAGCTTGTTT TCCGTACGGA CAAGTACGGT
TCCAAATCCA AGACGGTGGA ATGGTGGCAA CCAATGGCAA GGCCATTGCG AGTATGGGCG
ACAAAAATGA AGACATGGTG ATTGTTTGTA CCGCCGTTAC GGTGGGTTAC TAA
|
|---|
| Protein sequence | MPLTDPGKKC TVGRPSERKR NVRATFGKHL RQRDVNLEYI TPSNVAYVDR RDGLVHRGLR
HSTGLFLGFP EIENCGNVGV NESSDGGSSR NKNTLCGMRL TDRDVCFSLG FGADAHGQNS
TKAAVRACRN AIEFNQIPSI SDIVPGGRDN MKLDVLLAVP LTYQDGLDLN VIRACFPYGQ
VRFQIQDGGM VATNGKAIAS MGDKNEDMVI VCTAVTVGY
|
|---|
| |