| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_40280 |
|---|
| Symbol | |
|---|
| ID | 7198331 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011691 |
|---|
| Strand | + |
|---|
| Start bp | 1622 |
|---|
| End bp | 2812 |
|---|
| Gene Length | 1191 bp |
|---|
| Protein Length | 329 aa |
|---|
| Translation table | |
|---|
| GC content | 50% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002184281 |
|---|
| Protein GI | 219128148 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCAAT ATTTGCTTGA ACGAACAACA GCGTGGTTGA CGACTTGGAG TCTCATTCTG
CTCGTGGCCG TTGCTCAAAA AGATGTTCAC CCTGACGTAG TTGCCGTTGT TGATGTTGCC
GGAGGTGTAC AACCGACACC ACTTTGGGCA AGCAGTTATT CGGACGGCGA GAATTGCTAC
TGCCTTCCTT CGTTGGATAG CGCCTTTGGG AACTTTGTCG TAGAAACGCC ATTGGGGTGG
CTGACGATGC AGGAACTTTG TGACCTGCTA GGAACTGGAC CAGGAAGACT AGGACAATAC
CTTTACAATG ATATCCAATG CGGTAACGGC CCCCCAAACG CTGACGAAAA CGAATTTCTT
TGTCCGGGAC GAACAGATGT AAGTAAGCCG AGCGCTGCCC CCTAGCGGAA ACAAATACAA
TTCAACAGAA AGCTTTGCAC GGATTCGCTC TTTCTTAGAT TGGGGAAACA GGCTGTGGTC
AAATAGGACC CAAATGGAAT GTTGACAATG CCTACCTTGC GGACGCCGGC CCCCCACGAC
TTCCATTGTT GCCTGAGGAC GTTCAACCGG AAACCGTTGC GGTGATTGAC GTTGTGGGTG
GTGTGACGCT GAATGGAAGA TTGTGGGTCA ACGGGTATTC CATTGCGGAC AGGTGCTATT
GTGCGACAAC GTTTGATCAC GACATTGCGG ACGTACTAGT AGAAACACCT TTGGGATGGA
TGACGATTCG GCAAGCTTAC GCGGTACTTG GACCTGGGTC CCGGTATGGA AGGAGGACCG
GTGTACAATG ACATACAGTG CGGGAGTGGA CCACCTAATA ATGCAGGAGA TGAGGATGCC
TGTCCTGGAA GAGCTGATGT ATGTTGACTG GAATGCGGTA GACTGGCTAG TATTTTCAGA
CCGTTGTTTC CTTGGACTTG TTGTGATGAA ATGCCTCACC ATGATGCTTC TCCCTTGTAC
AATACACAGC TTGGACCAGA AGGTTATGGT CAGATTGGTC CCCGTTGGAA TTTTGATGTC
ACCAAATCTT TACCGCCAGG TAGCGCTCCC ATGGCTCTTC CCTCTTCTTT AGCAGCCGTA
GCAGTGTTGG TCCCAATGCT ACCGGGCGTA GGAGTGATCA CCGGACTTTT GTTCTGTGTT
TTGAACTGGC ATATTTTTGA TCTCGTCCGG TGTCACCAGG GCGTCTGGTG A
|
|---|
| Protein sequence | MKQYLLERTT AWLTTWSLIL LVAVAQKDVH PDVVAVVDVA GGVQPTPLWA SSYSDGENCY
CLPSLDSAFG NFVVETPLGW LTMQELCDLL GTGPGRLGQY LYNDIQCGNG PPNADENEFL
CPGRTDIGET GCGQIGPKWN VDNAYLADAG PPRLPLLPED VQPETVAVID VVGGVTLNGR
LNTFGMDDDS ASLRGTWTWV PVWKEDRCTM TYSAGVDHLI MQEMRMPVLE ELIPLFPWTC
CDEMPHHDAS PLYNTQLGPE GYGQIGPRWN FDVTKSLPPG SAPMALPSSL AAVAVLVPML
PGVGVITGLL FCVLNWHIFD LVRCHQGVW
|
|---|
| |