Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_4014 |
Symbol | |
ID | 7198244 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011691 |
Strand | - |
Start bp | 121416 |
End bp | 122063 |
Gene Length | 648 bp |
Protein Length | 216 aa |
Translation table | |
GC content | 56% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002184399 |
Protein GI | 219128394 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.545391 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | CCCCGCGTCT ACGTTACCCG CTTCCCCGGT GACGCCACGG CTTCCCAAGT CGCTGACTTG CGCGAAGAAG TCACCGCCAT TGTCCGCCAC GCACAACCCG GCGACCAAGC ACTGGTCGTC CTGCAAACGG GTGGCGGAAC CGTCACGGGC TACGGATTAG CCGCCGCACA ACTACAGCGA TTTCGGGACG CCGGCATGCA ACTCACCGTG GCCGTGGAAC AAGTCGCCGC ATCGGGGGGA TATCTCATGT CCTGTGTCGC GGACCGCATC GTCGCCAGCC CCTTTGCCGT CCTCGGATCG ATCGGCGTCA TTAGCGATAT TCCCAACGTC TATGATCGAC TCAAAAAGGA GGGCATCGAG TTCCAAACCG TCACGGCCGG CAAGTACAAA CGGACGTTGA CACCCACTAA AAAAGCGACC AAGGAAGATT TTGACAAGAC GAAAAAGGAC GTGGAAGATA TCCTGGTACT CTTCAAAGAG TTCGTCCACC AGAATCGACC CCAACTGGAT ATCGACCAGG TCGCGACGGG CGAAACCTGG TTCGGGAAGG ATGCGTTGGA TCGGAAACTC TGCGACGAAA TCAAAACGGT AGACGACGTG ATTATTGACT ACATGAATCA GAACTTTGAC GTGTACGAAG TCAAGTAC
|
Protein sequence | PRVYVTRFPG DATASQVADL REEVTAIVRH AQPGDQALVV LQTGGGTVTG YGLAAAQLQR FRDAGMQLTV AVEQVAASGG YLMSCVADRI VASPFAVLGS IGVISDIPNV YDRLKKEGIE FQTVTAGKYK RTLTPTKKAT KEDFDKTKKD VEDILVLFKE FVHQNRPQLD IDQVATGETW FGKDALDRKL CDEIKTVDDV IIDYMNQNFD VYEVKY
|
| |