Gene PHATRDRAFT_30502 details

Gene Information

• Locus tag: PHATRDRAFT_30502
• ID: 7198146
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011691
• Strand: +
• Start bp: 323357
• End bp: 324037
• Gene Length: 681 bp
• Protein Length: 197 aa
• GC content: 50%
• Product: predicted protein
• Protein accession: XP_002184345
• Protein GI: 219128281

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 0.00834692
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGTAGGTCA ACAGTTTTGA GCTTTGAGCA CGCGCTGCGA AAGCAGATCT GGATTGGGAC 
TACGTGCCAC TGTTATCTGC ATCTTTGACC ATGGACCTTG GTTTTGGAAA TTCAAATCAA 
GTCGTTGGTG GAACAGCGGC CAAGGTGATC CTACAAACGA CAAAGGCCCA AGAGCAGGCG 
GTACAGCAGG AGATCGACCG CTACGATGCT TTGTTGCAAG ACGATGATGC ACTCGAAGAC 
CTCCGTGCAA AGCGCCTTCA TCAGATGAAG AAAGCTCAAG AGCAGCGTCA AAAATGGCAG 
GCAGCGGGGC ACGGAACCTA CACTGAATTG GGGGCCGGGC ATGACTCGCG CGACGTAGGT 
CGTGATTTCT TTGAAGCCTC GAAGCAGTCA GAGCGTCTCG TTGTGCACTT TTACAGGCCT 
TCAACGCGCT TGTGTGACAT TTTTCACGCT CATCTTGCAA AACTAGCGCC CAGACGTATG 
GAAACCAGAT TTGTAAAAGT CAACGTGGAA AACTGTGATA AGGAAGGCGG AGGAGCATCC 
TTCCTTGTGG AACGTTTGGG TATTGTCGTC ATGCCAACTA TCGTTATTGT AAAAGACCGC 
AAAGCGGTTC ACCACATTCG AGGATTTGAC GAGCTTGGAG GAACGGATGA CTTTTCCACC 
TCTGCTCTGG AATATGTTCT C 

 

Protein sequence

MDLGFGNSNQ VVGGTAAKVI LQTTKAQEQA VQQEIDRYDA LLQDDDALED LRAKRLHQMK 
KAQEQRQKWQ AAGHGTYTEL GAGHDSRDVG RDFFEASKQS ERLVVHFYRP STRLCDIFHA 
HLAKLAPRRM ETRFVKVNVE NCDKEGGGAS FLVERLGIVV MPTIVIVKDR KAVHHIRGFD 
ELGGTDDFST SALEYVL