| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_23423 |
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| Symbol | Sit1 |
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| ID | 7198177 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011691 |
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| Strand | + |
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| Start bp | 486429 |
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| End bp | 488211 |
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| Gene Length | 1783 bp |
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| Protein Length | 506 aa |
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| Translation table | |
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| GC content | 52% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002184376 |
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| Protein GI | 219128346 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | AGGAAACTCC GAAACGTTCC TACCAAGAAC ATCTCGATCT ACTCTGCTTG AACAAAGACC
CTTTCACCGA CGACACCATG GCGGACGTTG CCAACATTTT GAAGTGTGCC TACTCGGTGG
GCCTGCTCAT CTTCTCTACC ATCATCATTA TGGGTCTCAT CTTCAACGAA GAAACCAAAC
TCTCGTCCGA CGTTCACTCA GCCGTTGCCT TTATTGCTAT CTGGGTCGGT GTGTTGTGGC
TAACCATGGT GGAGGGCGGC CAAGGGTCTT TGGTCGGTCT GGCGCCCGTT AACGGAGAGC
TCTACAAGGA CTCCCATCCA ATCGCCTACA AATGCACTTC GATTGCCCAC AAGGGCGACA
ACCTCGATCG GTACCTGCTG GGTCGCCAGT TCATGGTGGT GCTGACTGTC TTCACCATCA
ACATCTCGGG CGGTCCCCTC AAGGACGCCG AGCTTTGGGG TTTCCCTTCT GTCCTGACCA
ACATGTTTCT GGGTAGTGGT CTGGCCATGA TTCTCTTCAC GGCCATGATT GGCCAGCTGA
ACTCTCAAGT CAACGCGTCA CTGTGCATGC TCGACTACAT TAACAACTAC TTCGCGCTGT
TCACCTTCTG GGTCGCTATG GCGATTGAGT TTTCCGGTCT ACTTCACGCC TCCTACCTTG
TGCAGATGCT TGTTGCTGCG CTTTCCGGCA AAAAGATCGA GTCCAACGAG GAGCCGCGCA
ACGGACTACA GAACCTCTTC TTTTGGTCGC GCTGTCTCGT TTCTCTCGCC ATCCTGGCCT
ATTGCTTTGC GGTGACTTTA GCCGCTCTCT TTGACGGCAA GACCACCATG TGGGAAGGTG
TTCCGTCGGC TGTTGCTGTC ATTGTCTTCT TCCTGCTCAT GTCCGTTGTT GGCTTGCTCG
AGGGTATGCA GATTGCCTTC TTTGCTGTGG CTAAGATCCC CAAGTCCGAG CGAGGAGATT
CCGTGTTTGC CAAGAAGACG TGCGAACTTC TCTTCAAAGG CGAAGGAAAT AACCTTCCGG
GCTTCATGAT TGGGCGACAG CTGTGTGTTG TTTCCTGCAT GTTCTTCATT GCTCGCGTCA
CTAGTGTCGA GATTGCCGAA GGAGAAGAGA ACATCTTCGG AGTCTCGGAC GGCGTCCAAA
AGCTCTTCGA CACGGGTCTT CTCGGGGCCA TCATCACCAC AATTGTGGCG TCCATTTCAT
GGCAGCTTGT GGCCTCAGCC TTCCCTATCG CTTTCCTGTC CAACCCCTTC ACCTATATCT
TCCTTCGCAT TTGTCTTCTG TTAGAAGCTA TTGGTATCTG CTCCGGAGCT TGGGTTCTTG
CTGCGATTCA CAAGAAAATT GCCGGTTTCC AGCGTGACGA GGTGTACATT GGTACTGCCG
AGGAACGTGC CGCCAAGAAC ATGAGTGACA ACACAGAGCA GCTACATTTG GGAGCCGGCC
ATTTGGTCAA ACTTCCTGGC TTTGCTGAGC ACGCGCCACC GGCCTTGAAG GCGCTTATGG
AGACCAATCC GTCCGTTGCC GTATACCTCA ACTCCATTCA TGACATGGAG ACTGGCAAAG
GCAACAAAGG TCAGGAGTCC GAGACTGAGA CCGAGTAAGA AGTACACCGC ATTTGGTGGT
TAGAGTCAAG AGTGGACTCA AGTCATACGA AACTCGAGTA AAGTCAGTAA ATTTTGAAAT
GTGCAGCAAA CTCGACGGCT CCGCACCAGA TGGATGGATG GAGCAATCAG ATATCGTAAT
CCTACAGTTA ATAAATACCC CAGTAAATCG TTCGATTCAT TTC
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| Protein sequence | MADVANILKC AYSVGLLIFS TIIIMGLIFN EETKLSSDVH SAVAFIAIWV GVLWLTMVEG
GQGSLVGLAP VNGELYKDSH PIAYKCTSIA HKGDNLDRYL LGRQFMVVLT VFTINISGGP
LKDAELWGFP SVLTNMFLGS GLAMILFTAM IGQLNSQVNA SLCMLDYINN YFALFTFWVA
MAIEFSGLLH ASYLVQMLVA ALSGKKIESN EEPRNGLQNL FFWSRCLVSL AILAYCFAVT
LAALFDGKTT MWEGVPSAVA VIVFFLLMSV VGLLEGMQIA FFAVAKIPKS ERGDSVFAKK
TCELLFKGEG NNLPGFMIGR QLCVVSCMFF IARVTSVEIA EGEENIFGVS DGVQKLFDTG
LLGAIITTIV ASISWQLVAS AFPIAFLSNP FTYIFLRICL LLEAIGICSG AWVLAAIHKK
IAGFQRDEVY IGTAEERAAK NMSDNTEQLH LGAGHLVKLP GFAEHAPPAL KALMETNPSV
AVYLNSIHDM ETGKGNKGQE SETETE
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