Gene PHATRDRAFT_23399 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_23399 
SymbolMETH 
ID7198319 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011691 
Strand
Start bp421969 
End bp428366 
Gene Length6398 bp 
Protein Length1245 aa 
Translation table 
GC content56% 
IMG OID 
Productmethionine synthase 
Protein accessionXP_002184461 
Protein GI219128523 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TCTACCCCCG GGTCGAGTTT GACTACGACA AGATTCCCCC CAAGCCTGCA ACGGAACCGC 
CCCTGCCGAC TTCCGCCGCC GCTCGCAATC ACGTGCCCAA TCCCTACGTC AATACGACTC
TCACGCACGA CCGGATCCAA GAAATCCGTA ATCGCAGTAC CCTGACCCCC GCGCAGCGGA
ACGACATTGA CTACCCACAA CCGGTGGACC TGTACCCCAC GGACTTTCCG TACTATGTGC
GGGGTCGCGA CAGTCTGCGG ACCTACATCA CGAAGCTGTT TACGTCGCAG ATTGCCATTT
ACGACGGGGC CATGGGCACC ATGATCCAGA ACTACGCCAA GAAGAACCGA CTAGACGAGG
AAGAGTACCG GGGCGAGCGA TTCCGCGACT GGAACTGCGC CGTCAAGGGC AACAACGACA
TGCTCAGCAT CTCGCAGCCC CACATCATCA AGGGTATCTA CATGCAGTAC CTGGAAGAGG
GCGGCAGCAA CATGATTGGG ACCAACACGT TTTCCTCCAC CACCATTGCT ATGGCGGACT
ACCAGATGGA AGCGTACGCG TACGAGCTGA ACTACGTGGG CGCTCGGTTG GCGCGGGAGG
CCTGCGATGA AGTGACGGCC AAAGACCCTA GTAAGCCGCG TTTCGTGGTG GGAGCCATTG
GACCCACGAA TCGTACGTGT TCGATCTCGC CGTCGGTGGA GGACCCCGCG GCACGCAACG
TGACGTTTGA CGAGCTGGTA GAGACGTACC TGGAGCAGGT GGTGGGTCTG GTGGACGGCG
GTGCCGACGT GCTCATGGTG GAGACCATCT TCGACACGTT GAACGCCAAG GCGGCGTTGT
ACGCGATCGG AGAGTTTCTG GAGTTTAGCG GGTTGGACAT TCCCGTGTTT GTGAGCGGCA
CACTGGTGGA CCAGTCGGGT CGTACACTGT CGGGACAGAC GGGCGAGGCC TTTTACGTTT
CGATCCGGCA CGCCAAGCCG ATGTGTGTGG GCTTGAACTG TGCGTTGGGC GCCAAGCACA
TGGTACCCTT TGTGGAGCGC TTGAGCAAGG CGGCCGAGTG TTTTGTGCAC GTGTACTCGA
ACGCGGGTCT GCCCAACGCC ATGGGCGGGT ACGACGACAC GCCGGAAGAC ATGGCGCGCG
AGAACGAGGT GTTTTTCGAG AACGGCTGGT TGAACATGGT CGGAGGGTGC TGCGGGTCCA
CGCCGCCGCA CATCAAGGCC ATCCGCGAGA CGGCAGAGCG GTACCAGCCC CGCAAGCTGC
CGGATGTGGG CCGGCCCAAG ATGTGGCTGT CGGGGCTGGA GGACCTGAAG GTGGAGGACG
TGCACAACCA GCTGGGTTTG CCGTTTCTGA ACGTGGGCGA GCGGTGCAAC ATAGCCGGGT
CGATCAAGTT CAAAAAGCTC ATGATGAAGG GCGATTACGG CGCGGCCATG GACATTGCGA
AGCAGCAGGT GGAGGACGGC GCGCACGTGA TCGACATCAA CGTGGACGAC GGTATGCTGG
ATGGCCTAGC GGCGATGCAA AAGTTTGTGA AGATCGCGGT GACGGAACCG GAGATTGCCA
AGGTGCCGTT CATGCTGGAC GCGTCCAAGT TTGACATTGT CATGGCGGGT CTCAAGTGGT
GTCAGGGCAA GTGCATTGTG AACTCGATTT CGCTCAAGGT GGGCGAGGAG CTGTTTATGG
AGCAGGCCAC GTTGCTGAAG AAGCACGGCG CCGCGGTGGT TGTCATGGCC TTTGATGAGC
AGGGTCAAGC GGCCACGGAA GACGAGAAGA TCCGTATCTG CAAGCGGTCG TACGACGTTC
TGGTGAACAA GGTGGGTTTC CCACCGGAGG ACATTGTGTT CGACCCGAAC GTACTGACGA
TTGGTACGGG TATGGAAGAG CACGCGAACT ACGGTGTGGA TTTTATCAAT TCTGTGAAGC
GCATCAAGGA GGAGTGTCCG TACGTGAAGA TTAGTGGGGG TATCTCGAAC TTGTCGTTTG
GCTTCCGGGG TGTGACGAAG ATCCGGGAAT CGATCCACGC GGTGTTCTTG CACCACGCTA
TTACCGAGTC GGGCATGGAT GTTGGCATCG TGAACTCGCA CGAGCTACTG TCCGTTGATG
ACTTGGAACC CGATATGAAG CTTTTGTGCG AAAACCTTGT ATTCAATAAG ACTCCCGATG
CCACAGATGA TATGCTTGAA CGTACAAACT TCGAGCGATC CGTCCTGGAA GCCAAAAAGA
AAGGCTTGCC CCCGCCGCGT AAACCGCGAG GCAAGCTTCC GAATCTTCCA CGGGTCGAGT
TTGACTACGA CAAGATTCCC CCCAAGCCCG CTACGGAACC GCCCCTGCCG ACTTCCGCCG
CCGCTCGCAA TCACGTGCCC AATCCCTACG TCAATACGAC TCTCACGCAC GAGCGGATCC
AAGAAATCCG TAGTCGCAGT ACCCTGTCCC CCGCGCAGCG GAACGACATT GACTACCCAC
AACCGGTGGA CCTGTACCCC ACGGACTTTC CGTACTATGT GCGGGGTCGC GACAGTCTGC
GGACCTACAT CACGAAGCTG TTTACGTCGC AGATTGCCAT TTACGACGGG GCCATGGGCA
CCATGATCCA GAACTACGCC AAGAAGAACC GACTAGACGA GGAAGAGTAC CGGGGCGAGC
GATTCCGCGA CTGGAACTGC GCCGTCAAGG GCAACAACGA CATGCTCAGC ATCTCGCAGC
CCCACATCAT CAAGGGTATC TACATGCAGT ACCTGGAAGA GGGCGGCAGC AACATGATTG
GGACCAACAC GTTTTCCTCC ACCACCATTG CCATGGCGGA CTACCAGATG GAAGCGTACG
CGTACGAGCT GAACTACGTG GGCGCTCGGT TGGCGCGGGA GGCCTGCGAT GAAGTGACGG
CCAAAGACCC TAGTAAGCCG CGTTTCGTGG TGGGAGCCAT TGGACCCACG AATCGTACGT
GTTCGATCTC GCCGTCGGTG GAGGACCCCG CGGCGCGCAA CGTGACGTTT GACGAGCTGG
TAGAGACGTA CCTGGAGCAG GTGGTGGGTC TGGTGGACGG TGGTGCTGAC GTGCTAATGG
TGGAGACCAT CTTCGACACG CTGAACGCCA AGGCGGCGTT GTACGCGATC GGAGAGTTTT
TGGAGTTTAG CGGGTTGGAC ATTCCCGTGT TTGTGAGTGG CACACTGGTG GACCAGTCGG
GTCGTACACT GTCGGGACAG ACGGGCGAGG CTTTTTACGT TTCGATCCGG CACGCCAAGC
CGATGTGTGT GGGCTTGAAC TGTGCGTTGG GCGCCAAGCA CATGGTACCC TTTGTGGAGC
GCTTGAGCAA GGCGGCCGAG TGTTTTGTGC ACGTGTACTC GAACGCGGGT CTGCCCAACG
CCATGGGCGG GTACGACGAC ACGCCGGAAG ACATGGCGCG CGAGAACGAG GTGTTTTTCG
AGAACGGCTG GTTGAACATG GTCGGAGGGT GCTGCGGGTC CACGCCGCCG CACATCAAGG
CCATCCGCGA GACGGCAGAG CGGTACCAGC CCCGCAAGCT GCCGGATGTG GGCCGGCCCA
AGATGTGGCT GTCGGGGCTG GAGGACCTGA AGGTGGAGGA CGTGCACAAC CAGCTGGGTT
TGCCGTTTCT GAACGTGGGC GAGCGGTGTA ACATAGCCGG GTCGATCAAG TTCAAAAAGC
TCATGATGAA GGGCGATTAC GGCGCGGCCA TGGACATTGC GAAGCAGCAG GTGGAGGACG
GCGCGCACGT GATCGACATC AACGTGGACG ACGGTATGCT GGATGGCCTA GCGGCGATGC
AAAAGTTTGT GAAGATCGCG GTGACGGAGC CGGAGATTGC CAAGGTGCCG TTCATGCTGG
ACGCGTCCAA GTTTGACATT GTCATGGCGG GTCTCAAGTG GTGTCAGGGC AAGTGCATTG
TGAACTCGAT TTCGCTCAAG GTGGGCGAGG AGCTGTTCAT GGAGCAGGCC ACGTTGCTGA
AGAAGCACGG CGCCGCGGTG GTTGTCATGG CCTTTGACGA GCAGGGTCAA GCGGCCACGG
AAGACGAGAA GATCCGTATC TGCAAGCGGT CGTACGACGT TCTGGTGAAC AAGGTGGGTT
TCCCACCGGA GGACATTGTG TTCGACCCGA ACGTACTGAC GATCGGTACG GGTATGGAAG
AGCACGCGAA CTACGGTGTG GATTTTATCA ACTCTGTGAA GCGCATCAAG GAGGAGTGTC
CGTACGTGAA GATTAGTGGG GGTATCTCGA ACTTGTCGTT TGGCTTCCGG GGTGTGACGA
AGATCCGGGA ATCGATCCAC GCGGTGTTCT TGCACCATGC TATTACCGAG TCGGGCATGG
ATGTTGGCAT CGTGAACTCC GCCGAAATGC TGGCAATCAG CGAGGTTGAA CCCGAGCTTC
GCATTGCTTC TGAAAACCTT GTATTCAATA AAAATCCGGA GGCTACTGAT ACTATGCTCT
TGCTCACGCA AAAGGAGCGT GATGCCATGG AGGCTCGGAA GAAAGGTGGA GTTGTGGACG
AGGTCAAAAA GTCTTCCTGG CGCGATCTTG AACCGTCCAA GCGACTGGAG CATTCATTGG
TGAACGGTAT TTCCGAATTT GTCGATTCAG ACGTCGAAGA AGCTCGCGTG TTGGCCACCA
AGCCACTAGA TGTAATTGAG GGACCCTTAA TGGACGGCAT GAACGTTGTC GGGGACTTGT
TTGGAGCGGG AAAGATGTTT CTACCACAAG TCATCAAGTC TGCACGGGTC ATGAAAAAGG
CAGTCGCCTA TCTGTTACCG TTTATGGATG CAGAGAAGAG GGAAAATATG ATTGCGGCTG
GCTTGGATCC AGATGACGTT GATCCTGATG ACGACTCGAA TTACGCTGGC AAAGTGCTGA
TGGCCACAGT CAAGGGAGAT GTTCATGACA TTGGAAAGAA TATCGTCGCT GTTGTCCTTG
GATGCAACAA CTATAAAGTT TACGACATTG GTGTAATGTG CTCGTGTGAA AAAATTCTCG
CCAAGGCTAA AGAATACAAT GTCGATGTGA TTGGTCTCTC TGGATTAATT ACTCCTTCCT
TGGACGAGAT GGTTGATGTT GCCAAAGAAA TGTCCAAGCA AGGTTTCAAG CAACCCTTGC
TGATTGGTGG CGCCACTACT TCCAAGATGC ACACATCCGT GAAGATTGCT CCGAGCTACA
CAACCCCCGA GCACCCAACA ATTCATGTTC TGGATGCGTC TCGTTCCGTA ACGGTGGTCA
ACTCTCTTTT GGGAGAGAAC AAGGGAGAGT TTGTGGAGGA TATTATGGAG GAGTACGAAG
AAATGCGTGA AGATTACTAT GCAGGGCTCG AGGACCGCAA CTTTTTAACT TTTGAGAAGG
CCAAGGAGCA AAAGATTACG ATCAACTTTG ATCAATCACC GGTTGCAGAC ACTCCAAACA
AAATCGGCAT AACCGTCATT GATACGGTCA AGATTTCGGC GGTTGTTCCT TACATTGATT
GGAATCCATT CTTTCAGACG TGGGAGCTGC GTGGTCGATA CCCGAATCGA GGCTATCCCA
AGATTTTTAA CGACGAAGCG GTCGGAGGCG AAGCCAAGAA ACTTTTCCAT GATGCGCAGA
CGATGCTGAA TCAAATCTGC GAGGACGGCT CCATGACGTT GAAGGGAGTT GTCGGTATCT
TCCCGGCGAA CCGTAGTGAG GATGGCGAGG ATGTGCACGT TTATGAGACG GAAGCCGATC
GCGAATCAGG AAATGTGTCG ACTACGTTCT GTATGTTGCG CCAGCAAGCC GAGAAGGAGT
CCGACGACCC GTATTTGTCC CAAGCCGACT TTGTCGCCCC CGCGGGTTAC AAGGATCACT
TGGGTATGTT TGCTGTTTCT TGTTTTGGTT GTGACGCTCT AGTGAAGAAG TTCGAATCCG
AGAACGACGA CTATTCCAAG ATTATGGCAC AAGCTTTGGC GGATCGTTTC GTCGAGGCGT
TTGCCGAGTA CGTGCACCGC GAGATGCGTC TGGATCTCTG GGGATACGCG GCTGGCGAAC
AATTGAACGA GTCCGATTTG CTCAAGGTGA AATACGACGG TATTCGCCCC GCTCCGGGTT
ACCCGTCGCA GCCGGACCAT ACGGAAAAAC GCACAATGTG GAATCTCCTG CAGGCGCAGG
AACTGGCCGG CATTGAATTG TCGGAATCGC TGAGCATGAT GCCGGCGTCG TCCGTTTCGG
CGTTGGTCTT TGCGCACCCC GAGTCCGAGT ACTTTGCCGT GGGCCAAGTG GGTAAAGATC
AGGTAACGAA TTACGCGTCA CGCAAACAGA TGGATTTGGC ACTCTGCGAA CGATGGCTGT
CTCCTATTCT TAATTACGAA CGAGATTAAA ACCCTGTAAG GTGTCGAGAG AAAAAAGCCG
TCGGTGATAT ATTGCAATAA TCCATGGTAT AATTATGC
 
Protein sequence
MGTMIQNYAK KNRLDEEEYR GERFRDWNCA VKGNNDMLSI SQPHIIKGIY MQYLEEGGSN 
MIGTNTFSST TIAMADYQME AYAYELNYVG ARLAREACDE VTAKDPSKPR FVVGAIGPTN
RTCSISPSVE DPAARNVTFD ELVETYLEQV VGLVDGGADV LMVETIFDTL NAKAALYAIG
EFLEFSGLDI PVFVSGTLVD QSGRTLSGQT GEAFYVSIRH AKPMCVGLNC ALGAKHMVPF
VERLSKAAEC FVHVYSNAGL PNAMGGYDDT PEDMARENEV FFENGWLNMV GGCCGSTPPH
IKAIRETAER YQPRKLPDVG RPKMWLSGLE DLKVEDVHNQ LGLPFLNVGE RCNIAGSIKF
KKLMMKGDYG AAMDIAKQQV EDGAHVIDIN VDDGMLDGLA AMQKFVKIAV TEPEIAKVPF
MLDASKFDIV MAGLKWCQGK CIVNSISLKV GEELFMEQAT LLKKHGAAVV VMAFDEQGQA
ATEDEKIRIC KRSYDVLVNK VGFPPEDIVF DPNVLTIGTG MEEHANYGVD FINSVKRIKE
ECPYVKISGG ISNLSFGFRG VTKIRESIHA VFLHHAITES GMDVGIVNSH ELLSVDDLEP
DMKLLCENLV FNKTPDATDD MLERTNFERS KGGVVDEVKK SSWRDLEPSK RLEHSLVNGI
SEFVDSDVEE ARVLATKPLD VIEGPLMDGM NVVGDLFGAG KMFLPQVIKS ARVMKKAVAY
LLPFMDAEKR ENMIAAGLDP DDVDPDDDSN YAGKVLMATV KGDVHDIGKN IVAVVLGCNN
YKVYDIGVMC SCEKILAKAK EYNVDVIGLS GLITPSLDEM VDVAKEMSKQ GFKQPLLIGG
ATTSKMHTSV KIAPSYTTPE HPTIHVLDAS RSVTVVNSLL GENKGEFVED IMEEYEEMRE
DYYAGLEDRN FLTFEKAKEQ KITINFDQSP VADTPNKIGI TVIDTVKISA VVPYIDWNPF
FQTWELRGRY PNRGYPKIFN DEAVGGEAKK LFHDAQTMLN QICEDGSMTL KGVVGIFPAN
RSEDGEDVHV YETEADRESG NVSTTFCMLR QQAEKESDDP YLSQADFVAP AGYKDHLGMF
AVSCFGCDAL VKKFESENDD YSKIMAQALA DRFVEAFAEY VHREMRLDLW GYAAGEQLNE
SDLLKVKYDG IRPAPGYPSQ PDHTEKRTMW NLLQAQELAG IELSESLSMM PASSVSALVF
AHPESEYFAV GQVGKDQVTN YASRKQMDLA LCERWLSPIL NYERD