Gene PHATRDRAFT_23375 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_23375 
Symbol 
ID7198145 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011691 
Strand
Start bp315370 
End bp316413 
Gene Length1044 bp 
Protein Length323 aa 
Translation table 
GC content52% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002184441 
Protein GI219128482 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000883702 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTAATGGCAC CCATGGTGGG CGCCAGTGAC TTTGCCTTTC GCTGCCTTTG TCGACAACAC 
GGGGTCGATC TCACCTACAC GCAAATGATT CACGCCAAAA ATTTATTGGG GGACAACACC
TTTTCCAAAT CCCATTTGGA CATGCATGAA CGTACGGACC GTTTGTTGGA CCACGGCATC
TTGCTACCTC AACAAGAAGT CTGCCTCAAA GGTCTCCAGG GAGATCGTAG TTTGCCCCCC
GAGCTGAAAC CCTTCACAAA TGGTCCCTTG ATGGTACAAC TGGCTGGTAA TAGTGTGGAT
ATGGTCTTGC GAGCGGCTCA ATACGTGCTA GATCAGACGG ACGGCAAGGT GGATGGTTTT
GATCTCAACT GCGGCTGTCC GCAGGGTATT GCCCGCAAAG GTCGCTACGG CGCTTTTTTG
ATGGAAGAAG ACACGGATCT GGTTTGTCGC ATTCTCTCCG CACTACGCCA AGAACTACCC
GCGAACATTG CCGTATCGGC TAAAATCCGC TTACCAGTCA CGGATGAAAT GCTCGTTGCT
CGGATGCCCA AACTGTTGGA TACGGGCGTC GACTTTATGA CCATACATGG TCGGACCCTG
CACGAAAATA AAACCAAGGT TCGCGGCGTC CACACCGATC GGATTAGATT AGCTATCGAG
ACGGTCCATA AGCAACGGCC TGGGTTCCCC ATTGTGGCCA ATGGTGGTGT CGAGCACATG
CCAGACGTGG CCAATCTACA AGCTCGTACC GGTGCCGTGG CTGTCATGTC CAGTGAATCC
TTGCTGGAGT TCCCCAACAT TTTTTCCATC GATACGCGCA AGCTGACCCC GCGACAAATT
CTGGAACAGC AGATTGGATT TGCACGCGAT TACCTGGGCT GGTGCCGGGT GTATCCTCCT
CTACCGGGAG TCGCGGGCAA TGGAGGTTCT TTCAACGCTA TCAAAGGCCA TCTATACAAG
TTTCTCCACC GGTATTTGCA GGAATTTCCG GAGTTAAGGG ACGAAATGAC GTACATGACG
ACGCTGCAGC AGTCCATTGA TTTT
 
Protein sequence
MAPMVGASDF AFRCLCRQHG VDLTYTQMIH AKNLLGDNTF SKSHLDMHEH RSLPPELKPF 
TNGPLMVQLA GNSVDMVLRA AQYVLDQTDG KVDGFDLNCG CPQGIARKGR YGAFLMEEDT
DLVCRILSAL RQELPANIAV SAKIRLPVTD EMLVARMPKL LDTGVDFMTI HGRTLHENKT
KVRGVHTDRI RLAIETVHKQ RPGFPIVANG GVEHMPDVAN LQARTGAVAV MSSESLLEFP
NIFSIDTRKL TPRQILEQQI GFARDYLGWC RVYPPLPGVA GNGGSFNAIK GHLYKFLHRY
LQEFPELRDE MTYMTTLQQS IDF