| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_23365 |
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| Symbol | SKT1 |
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| ID | 7198263 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011691 |
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| Strand | + |
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| Start bp | 229029 |
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| End bp | 230885 |
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| Gene Length | 1857 bp |
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| Protein Length | 511 aa |
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| Translation table | |
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| GC content | 52% |
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| IMG OID | |
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| Product | succinyl-coenzyme A:3-oxo-acid coenzyme a-transferase |
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| Protein accession | XP_002184327 |
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| Protein GI | 219128244 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CTTTGGTTGC GAACGACCCA CGTTGCACAA GCAAGGCAGG GCTCCAGCAT TTCTGCCCTT
GCTGATTAAT TCAGCATTCA AAGTGCATAT TTTGATCACA GCGTGATCAG GATGCTTGTT
TCGGTTCGCG CTTTGACGGG CTTGACCCGA GCTTCGTCCT TCTGTTTCGT CTCTCGTCGT
TCGTTAGCGA CGCGTCCACT GAGCAAGGTT GTTGGTTCGG CCAAGGAGGC CTTGCAAGGC
GTCGATTTGT CCGGTGCTAC GATTGCTGCC GGTGGCTTTG GTTTGGGTGG CATCCCGGAA
ACTCTTTTGA ACGAAATTAG TCGGACAGAG TCCGCCAAGG ATTTGACCAT AGTATCGCTG
ACGGCGGGTG TCGACGGGTT CGGAATCGGA CGTTTGCTGG AAGCGAACAA GGTCAAGAGG
CTCATTAGTT CCTACGTTGG CGAAAACAAG TTTTTAGAAC AAGAATTCTT TGCTGGGCGT
CTGGAAGTCG AGTTGACGCC GCAAGGGACC ATCGCGGAGC GTTTGAATGC CGCGGGAGCG
GGTAAGTAGC CGCGAACGAA CCATTAATAC ATGGTTGCAT CCCGGCTCAC GACTTGACCA
AACGGTATGC TGCACAGGTA TCCCTGCCTT TTACACACCC ACCGGAGCAG GGACTATCTA
CTCTAAAGGT GGAATTCCCA TCCAGTACGT TCCGGACGGC AGTGGCAATG TCGCCATCGC
CAGTGAAGCT CGCGAGACCC GCGTCTTTGA CGACATTGAG TATGTTTTGG AGCACTCACT
CAAGGCGGGT GTTGCCATCG TCAAAGCTTA CAAGGCGGAT ACGCGTGGAA ATCTCATATT
CAAGGGAACT TCGGCCAACG CCAATCCCGA TTGTGCCATG GCCGGGAAAA TCTGCCTTGC
CGAGGTTGAA GAGATTGTGG AAGCGGGTGA AATTGGACCA GACGAAGTTC ATCTTCCTGG
AGTATACGTA CACAAGGTAC TGCTGGCTGC CGACAACGAA AAGCGTGTCG AACGATTAAA
GTTACAGGAC GGTTCCCAAA AGGGCGTCAT CGTGGGCGGG CGTGGACGGA TTATGCGACG
GGCAGCGAAA GAATTTGAAA ACGGCATGTA CGTGAATTTG GGCATTGGTA TTCCAACCAT
GGCGTCCAAC TATGTTCCCG AAGGAATACA GATTGAGTTG CAGGCGGAAA ACGGACTCAT
GGGAATTGGA CCGGTACGTC CAAGTTGAAG CGGTGGGCAA ACCTTGCAAT TGTTGAATCA
CTTCATTCTG ACGACGCTTC CTTGTTTGTC CTCCATAGTA CCCATCTTCT GAGTTGACCG
CTAGCCCGGA CTACATCAAC GCCGGTAAAG AAACAATCAC TCCATTGCGC GGAGCATCAA
CATTTAGCTC GTCCCGATCC TTCGGTATGA TTAGAGGAGG TCACATTGAC TTGACTATTT
TGGGGGGTCT ACAATGCAGC GCGTCCGGAG ATCTAGCGAG CTGGATTGTA CCAGGAAAGA
TTGTCAAGGG CATGGGAGGG GCCATGGATC TCGTCAACGC CATTGGATCT CGTGTCGTTG
TTACAATGGA CCACACAGCC AAGGATGGAT CTCCCAAGAT TCGGGATAAG TGCAGTTTGC
CATTGACAGG CCACAACGTT GTGGACCGAA TCATTACCGA CATGGGCGTC TTCGATTGCG
ATAAGAAAGG TAAGGGCGGT CTTACGCTGG TGGAAATTGC ACCCGGTGTT TCGGTAGATG
ATGTTCGAAA GGCAACCGCT TGTGACTTTA AAGTTGCATC CAGCCTTCCT CGGATGGACA
ACGAGTAAAT ACAATCTAGT CTCCGGGAGA CAAACAGGAA GCTAATTTAA GCGGTTT
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| Protein sequence | MLVSVRALTG LTRASSFCFV SRRSLATRPL SKVVGSAKEA LQGVDLSGAT IAAGGFGLGG
IPETLLNEIS RTESAKDLTI VSLTAGVDGF GIGRLLEANK VKRLISSYVG ENKFLEQEFF
AGRLEVELTP QGTIAERLNA AGAGIPAFYT PTGAGTIYSK GGIPIQYVPD GSGNVAIASE
ARETRVFDDI EYVLEHSLKA GVAIVKAYKA DTRGNLIFKG TSANANPDCA MAGKICLAEV
EEIVEAGEIG PDEVHLPGVY VHKVLLAADN EKRVERLKLQ DGSQKGVIVG GRGRIMRRAA
KEFENGMYVN LGIGIPTMAS NYVPEGIQIE LQAENGLMGI GPYPSSELTA SPDYINAGKE
TITPLRGAST FSSSRSFGMI RGGHIDLTIL GGLQCSASGD LASWIVPGKI VKGMGGAMDL
VNAIGSRVVV TMDHTAKDGS PKIRDKCSLP LTGHNVVDRI ITDMGVFDCD KKGKGGLTLV
EIAPGVSVDD VRKATACDFK VASSLPRMDN E
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