Gene PHATRDRAFT_16141 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_16141 
Symbol 
ID7198188 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011691 
Strand
Start bp61370 
End bp62575 
Gene Length1206 bp 
Protein Length373 aa 
Translation table 
GC content51% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002184295 
Protein GI219128177 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.182849 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TCGCACGAAG CCACACTCGA ACGTGATTAC CTGGACCAGT TGCAACGACC GTTGCAGCCT 
CTCAAAGATC ATTTGGAAAA CGTTACTTAC GAAACGTTCG AAAAAGATCC CGTCAAGTAC
GCTCGATACC AACAAGCCCT GAGTCTAGCG TACCAAGACC GTGCAAATAC ACCATTTTGT
GTCGTTTTGG TAGTGGGCGC TGGCAGAGGA CCTCTCGTGA CCTGTGCTTT GGCGGCGTAT
GAGGAGTTGG ACGTATCTCG TCGACCTCAA GCCCTGCGTG TCTTTGCAGT CGAAAAGAAC
CCCTCCGCTA TGGTATACTT ACAGGCCAAA GCGGCCCACG ACCAAACGTG GAAACAATAC
GGCGTAAGCC TTGTTCATAT TGATTTGCGT CAACTTGCAG TCGAATTGAT TGGAGGGACT
CCGGGGGATA TTGTGGTGAG TGAATTGTTG GGTTCTTTTG GCTGCAACGA ACTATCACCA
GAATGCTTGG ACGCTTTATT TACGACGACT GCAGTTCATG ATCGTACTGT GAGTATTCCC
ACCCGTTACA TCTCTCATTT GGCTCCCGTT TCGTCGGCGA AACTCCACTC TCAAGCGAGG
GTGCAGGCCT TGTATCCGAA CGAAGACGAG AGTGGTGTGC TGGGTTTGCA GACTGCCATG
GAAACGCCGT ATGTGGTACG GACACACGCT GCGTCACAAA CGCACCGCGA ACAGGATTGT
TGGGAATTTG TACATCCGTC TGTCAGTAGT GGGGACAAAA ACCGTACAGC CATGGTGGAG
TTCACGCCGG ATGCTGTACA GGGATGCGGG ACCGGTAGCG GAACGGGCGC TTTTGAGGAA
GAAGTTGCGT TGCTTGCACA ACAATGGAAT GTTCCACAGG GTTACGTCTT GCACGGCCTT
TTGGGAACGT TTACGGCCGA TTTGTATTAT AGTGCTCGGC TGGACAAGTT GGTTCAGATC
TCGACAGCTC CTTCCAATTT TTCGGTGGGT ATGTTTTCTT GGTTCCCGCT ATACTTCCCG
ATTGCGAACC CGTTGTATGT ACCAGCAAAC GCGAATGTGA CGGCTTACGT TCGGCGGCAA
TGGGATGTGG TTACGTCTCG TGTGTGGTAC GAATGGTCTG TGACCGTCCA CGATCAGAAT
GGAGATGTGC TTGGGATTTC GCCGCTGCAC AACATCAATG GACGCTCGTA TCACGTTTCC
ATGTAA
 
Protein sequence
SHEATLERDY LDQLQRPLQP LKDHLENVTY ETFEKDPVKY ARYQQALSLA YQDRANTPFC 
VVLVVGAGRG PLVTCALAAY EELDVSRRPQ ALRVFAVEKN PSAMVYLQAK AAHDQTWKQY
GVSLVHIDLR QLAVELIGGT PGDIVVSELL GSFGCNELSP ECLDALFTTT AVHDRTVSIP
TRYISHLAPV SSAKLHSQAR VQALYPNEDE SGVLGLQTAM ETPYVVRTHA ASQTHREQDC
WEFVHPSVSS GDKNRTAMVE FTPDAGYVLH GLLGTFTADL YYSARLDKLV QISTAPSNFS
VGMFSWFPLY FPIANPLYVP ANANVTAYVR RQWDVVTSRV WYEWSVTVHD QNGDVLGISP
LHNINGRSYH VSM