Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_16141 |
Symbol | |
ID | 7198188 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011691 |
Strand | + |
Start bp | 61370 |
End bp | 62575 |
Gene Length | 1206 bp |
Protein Length | 373 aa |
Translation table | |
GC content | 51% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002184295 |
Protein GI | 219128177 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.182849 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TCGCACGAAG CCACACTCGA ACGTGATTAC CTGGACCAGT TGCAACGACC GTTGCAGCCT CTCAAAGATC ATTTGGAAAA CGTTACTTAC GAAACGTTCG AAAAAGATCC CGTCAAGTAC GCTCGATACC AACAAGCCCT GAGTCTAGCG TACCAAGACC GTGCAAATAC ACCATTTTGT GTCGTTTTGG TAGTGGGCGC TGGCAGAGGA CCTCTCGTGA CCTGTGCTTT GGCGGCGTAT GAGGAGTTGG ACGTATCTCG TCGACCTCAA GCCCTGCGTG TCTTTGCAGT CGAAAAGAAC CCCTCCGCTA TGGTATACTT ACAGGCCAAA GCGGCCCACG ACCAAACGTG GAAACAATAC GGCGTAAGCC TTGTTCATAT TGATTTGCGT CAACTTGCAG TCGAATTGAT TGGAGGGACT CCGGGGGATA TTGTGGTGAG TGAATTGTTG GGTTCTTTTG GCTGCAACGA ACTATCACCA GAATGCTTGG ACGCTTTATT TACGACGACT GCAGTTCATG ATCGTACTGT GAGTATTCCC ACCCGTTACA TCTCTCATTT GGCTCCCGTT TCGTCGGCGA AACTCCACTC TCAAGCGAGG GTGCAGGCCT TGTATCCGAA CGAAGACGAG AGTGGTGTGC TGGGTTTGCA GACTGCCATG GAAACGCCGT ATGTGGTACG GACACACGCT GCGTCACAAA CGCACCGCGA ACAGGATTGT TGGGAATTTG TACATCCGTC TGTCAGTAGT GGGGACAAAA ACCGTACAGC CATGGTGGAG TTCACGCCGG ATGCTGTACA GGGATGCGGG ACCGGTAGCG GAACGGGCGC TTTTGAGGAA GAAGTTGCGT TGCTTGCACA ACAATGGAAT GTTCCACAGG GTTACGTCTT GCACGGCCTT TTGGGAACGT TTACGGCCGA TTTGTATTAT AGTGCTCGGC TGGACAAGTT GGTTCAGATC TCGACAGCTC CTTCCAATTT TTCGGTGGGT ATGTTTTCTT GGTTCCCGCT ATACTTCCCG ATTGCGAACC CGTTGTATGT ACCAGCAAAC GCGAATGTGA CGGCTTACGT TCGGCGGCAA TGGGATGTGG TTACGTCTCG TGTGTGGTAC GAATGGTCTG TGACCGTCCA CGATCAGAAT GGAGATGTGC TTGGGATTTC GCCGCTGCAC AACATCAATG GACGCTCGTA TCACGTTTCC ATGTAA
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Protein sequence | SHEATLERDY LDQLQRPLQP LKDHLENVTY ETFEKDPVKY ARYQQALSLA YQDRANTPFC VVLVVGAGRG PLVTCALAAY EELDVSRRPQ ALRVFAVEKN PSAMVYLQAK AAHDQTWKQY GVSLVHIDLR QLAVELIGGT PGDIVVSELL GSFGCNELSP ECLDALFTTT AVHDRTVSIP TRYISHLAPV SSAKLHSQAR VQALYPNEDE SGVLGLQTAM ETPYVVRTHA ASQTHREQDC WEFVHPSVSS GDKNRTAMVE FTPDAGYVLH GLLGTFTADL YYSARLDKLV QISTAPSNFS VGMFSWFPLY FPIANPLYVP ANANVTAYVR RQWDVVTSRV WYEWSVTVHD QNGDVLGISP LHNINGRSYH VSM
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