Gene PHATRDRAFT_49453 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_49453 
Symbol 
ID7195811 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011690 
Strand
Start bp283718 
End bp284625 
Gene Length908 bp 
Protein Length200 aa 
Translation table 
GC content55% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002184221 
Protein GI219128019 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CCGGTACAGA TCGTAGCCTC GGTCTCCATC GATCCAACTT GCAGGACACG CTGCTATAGG 
TACCGGTACC GGTACCGGTA CCGAGTTTGC CCTTTGGAAA TTGCGCAGAC ACTCGACGTG
TTGCGGCGGC CAAGTCGGAC CCAGTTGCCC GGCAAGCAAG TACGACTCAC AGTGAGTGCA
TATCCCATCC ACCTACCCAC ATACACACAC ACGGGCGCGT GTGACCATGG ACGGTGTGGA
GGATGCGCAG GACACCGTGG TTCGACTCGA AACGCTGGAC CAAAAGCACT TGCCCCAAGT
CGCGGATCTC TTTCGGGAAG CCTTTGCGAA TAAAAGGTGT TGTGGAGTGT TCGCCGTGGC
GGAGTCGGTG GCTGGAATGC AGAAAAGGTA CGCCAGCTAT TCCGCCGAAA AGTTTCAGTT
GGGTGTGGTT GCTCTACGTG GCGATGAAGT GCTCGGCTTT TGCCAAATGA CCACCCGGAA
GTTGCCCATG TATCCTTCGG GGGCCCATCA TTGCGAGGCC GGCGAAATGT ACATCGAAAC
GATCGCCGTC AGTGACCGGG CACGGGGTCA AGGAATCGGA GGAAAGCTCC TGCGATGGTC
GGAGGAAAAG GCGAGAGCGG AACACATGAA AAAGCTAACG CTGGAGGTCT TTCAAGGGAA
TCGTGCCATT GGTTTGTACG AAAGGTTCGG CTTCAAAATC GTTCCGCCCG ACGGAGACTG
TGTAGACGCG TGTTGTGAGA ATGTGACAGT GTGCTGCTTC TTCGGTCGAC CCTACGGATG
GTGCCATCCC AAATGGGGGA CACATATCAT GATCAAACAT CTCGAGTGAA ATTTGGACAC
GCCACACGGG GTTCGCGATA GTGCACCCAA ACCGATGTTT GATAAACTAG TTAGGATTGC
AAGTTGTT
 
Protein sequence
MDGVEDAQDT VVRLETLDQK HLPQVADLFR EAFANKRCCG VFAVAESVAG MQKRYASYSA 
EKFQLGVVAL RGDEVLGFCQ MTTRKLPMYP SGAHHCEAGE MYIETIAVSD RARGQGIGGK
LLRWSEEKAR AEHMKKLTLE VFQGNRAIGL YERFGFKIVP PDGDCVDACC ENVTVCCFFG
RPYGWCHPKW GTHIMIKHLE