Gene PHATRDRAFT_49435 details

Gene Information

• Locus tag: PHATRDRAFT_49435
• ID: 7195801
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011690
• Strand: +
• Start bp: 241844
• End bp: 244001
• Gene Length: 2158 bp
• Protein Length: 675 aa
• GC content: 48%
• Product: predicted protein
• Protein accession: XP_002184094
• Protein GI: 219127754

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CACAGTCATA CAAAAACAAG GTGATTGTCC CTGCCCTGGG ATTGGCATCA CCCACACGTT 
GTGATCTCTG CCACACCATA GAAAGTAGCA ACAATACACA AAAGTTCAGG GAATCTGTAT 
TGCCGCCAAA ATGTGTGATT TTGTCGCTGG TCCCCGACAT TCATTGAAAA GGGGATCCAA 
GGCATCTGTC TGGGGGCTTA TAGCTCTTGT CCAGAAACTT CCGTTAGAGA CAAATGCGGA 
TCGCAAATTG GATTTTTCCT ATCATCACAA TGTTCCAGCT GCAAAAATTT CCGATGCTCT 
AAAGTCTGCT CTACACGATA TGGGAATCAA TTCACATTCG ACGCCGAGAC CCGATGAAAC 
CGTGGAGATT GATATTAGTG GGTCGGCGCT CGGGAGTGAA GGCTTTCGGG AAGTTGTTAC 
GGACGGTTTC CTCAAATCAG TATTTGAAGA TGGCAGTGTG AACGAAGCAA TACTACCGTT 
AAGACATGTG CACCTGACGT CAAGAAGGAA CGATTTGGAC ACCGACTCCG TCTCTATTTT 
GTTTGGTGCC CTTACGAGTG ATACGAATGC ATCTAATACA TCTGGAACGC GAACTGATTC 
AAACTCAGAC CCAGCAAGCA TGATCGCATG CAAATCAATA ACGATCGAAA GCCTGGACCT 
TGGTTGGAAT AAACTGAATC CCGATGAAAA TTCCGCGAGC ACTGCGTTTC TTCAAGCCCT 
GCGTTTGCTG ATTGCCCACC CTTCGTGCTG CCCGAGTACG CTAAGACTCG ACAGCTGTGG 
GCTGGGCCCA GCGGCCTGCC GGGCCATCGG TAAAGGCATG ATCAATCGCT GGACGGAAGG 
AACCGACTCG GATATACTAA AGAGTCCGCA ACCCAAGCCC TTGTCATTGC ATTTTTGTAT 
GAATCAGGCC ATTGGAGATG GAGGAGCGGC CGCTTTGGCT GCCGCCATCC GAACGATTGC 
TTTGGCTAGC GACGAGAAGA CCGACCCAAA TAGAGCCGTG TTAGAATGCC TCGATCTTTC 
TGCTTGCGGC ATCGGTGATA CCGGTGCTGA GGCCCTCGCA CACGCTATTG AAAGCTCACC 
GAACTGCTTG ATCCGGCATT TGGATTTGAG CAATAATTGC ATCACCGATC AAGGAGCGAC 
TGCTCTCGGT CGCGCTCTTT TGAACCCTGA GCACGCAGGC ACAAGGCAAG GACCTGGTTT 
GTTGAGCTTA AATCTAAGCA ACAATAAGAA TATTGGTGAT CGTGGAGTGA TGGCTCTGGC 
AGAAGCTTGG GAAAAGCGAG GAATTGGCAC GTTATCGCTT AGTAGCTGCC ACATCATGGC 
CGAAGGTGCG AGCTACTTTG GCGCAGCACT GCGCAAGCTG ACTTCCAATA ATACAACCGA 
AGAAGAGAAA AAGGGCACCT CCTATCTAGA TTTGAGTGGA AATCCTCTCG GTGTTTTGCG 
AGGCAAGAAT AAGAAGGACG GGAGGAAGTA CTCCGCGAGT CGGCTAAAGA ACAAAGCTAG 
TGCGACAGCA GCTTCTTACA TGAATATGTT AAAAAAGGGT TTAAAGGGTG CCGGTGTGGA 
CGTTTCACCA GTATTTGGAT CTACGGCAGA GAGTGATGAT GATGAGGAGA AAACTGGAGG 
AGAATTGGAT GACGATGAAG CCAATGAGAG CCCCGACATA TCTAAAGCCA GGTGTGGTGC 
TAAAGCGTTG ACAAACGCTT TTTTGGGAGA TTCTTCAACC ATTGATTATA AAACTACTCA 
GAATTTAATG GCCTGTGATT TGCACATTCA TATTGGCCTT CGCCATTGCT TCATTGATCA 
TGGAGCGGCA GACGCACTAG CAGCTCTGCT GTTATTTGCG AGAAATGAAC TACATGTACA 
TTTGACGATG GATCTTGAAC TCAATCCAGT TTTGGAAGAT GAAATGCTAG TCGCATTGCA 
AGGTGACGAA CTCTACGAGG ATCGCCTGCA TGAAATGGCA GAACGACATA CAGATGCGAT 
GGAAGTCTTA CGAGACGCTA AAAGACGAGC GAGCGAAGCA GCCAAAGCGG CTTCGACTCG 
AGCAAGATAT TCTGAAGAAG CCTTTGAAGC GGATTGGGAT GCCGCACCAT CAGATTTTGG 
TGGTGACTTG GAGGATTCCG ATGGTGACTA TGAAGAGGAA GACGAAGAGT TTTACTAA 

 

Protein sequence

MCDFVAGPRH SLKRGSKASV WGLIALVQKL PLETNADRKL DFSYHHNVPA AKISDALKSA 
LHDMGINSHS TPRPDETVEI DISGSALGSE GFREVVTDGF LKSVFEDGSV NEAILPLRHV 
HLTSRRNDLD TDSVSILFGA LTSDTNASNT SGTRTDSNSD PASMIACKSI TIESLDLGWN 
KLNPDENSAS TAFLQALRLL IAHPSCCPST LRLDSCGLGP AACRAIGKGM INRWTEGTDS 
DILKSPQPKP LSLHFCMNQA IGDGGAAALA AAIRTIALAS DEKTDPNRAV LECLDLSACG 
IGDTGAEALA HAIESSPNCL IRHLDLSNNC ITDQGATALG RALLNPEHAG TRQGPGLLSL 
NLSNNKNIGD RGVMALAEAW EKRGIGTLSL SSCHIMAEGA SYFGAALRKL TSNNTTEEEK 
KGTSYLDLSG NPLGVLRGKN KKDGRKYSAS RLKNKASATA ASYMNMLKKG LKGAGVDVSP 
VFGSTAESDD DEEKTGGELD DDEANESPDI SKARCGAKAL TNAFLGDSST IDYKTTQNLM 
ACDLHIHIGL RHCFIDHGAA DALAALLLFA RNELHVHLTM DLELNPVLED EMLVALQGDE 
LYEDRLHEMA ERHTDAMEVL RDAKRRASEA AKAASTRARY SEEAFEADWD AAPSDFGGDL 
EDSDGDYEEE DEEFY