| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_40200 |
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| Symbol | |
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| ID | 7195833 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011690 |
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| Strand | + |
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| Start bp | 391864 |
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| End bp | 394177 |
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| Gene Length | 2314 bp |
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| Protein Length | 710 aa |
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| Translation table | |
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| GC content | 48% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002184124 |
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| Protein GI | 219127817 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00209699 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGAACGA ATTTTGCTTT GTCGACGCGC TGCTTTGCTT CTTCATCCGA CAACCATGAC
GAAGAGGAAC AACGAGACTC TCCGAAACAA AGATCCAAAC GCAGCCAAAC TAATCGGTCC
AAGAAATTCA AAATTGCTGA ATCAATCGAC CAGAGCAAAA TAGATAAGCT AGCACAAGCA
TTCGATGAAC TCGCTCGGAA GGAAGGCTTC GACTCGTCAA CAGCACGCTT TGCCGACGAT
GTGACGTTCG AGGACAAGTT TGACGACGAT TCGTTTCTGG ACGATGACGA TGATAACAAC
AAAGATAAAG TGGGAAACTT GCACCTAGAT GCATCCATGT TCAGTTTAAG TGACTTTATA
GATAAGAGTG AGGAAGATGG CGGCAATCCA ACCGATCAAG ATGACGAGGA CTACCTTGAT
TTTGGTGCAG ACATTGACAT GAGTATAGAA GCAAGGATTG CCGCTGCCAA ACGGGATATG
GATCTCGGTC GAGTCAGCGC CCCTCCCGAT ATGAGATCCT CGCGCAGGGA GGTAACTGCA
GCCGACCTTC GCAAACTTGG ATTTCGAACC GAGGCAAACC CATTCGGCAA CGACGAAACT
CCACGGAAGG AGCGCTTCCA GTTGGTAACA AACTCCATGT CGTGCTCCGC CTGTGGATCG
GACTTTCAAT GCCACAACGA AGATCGGCCC GGATATCTGC CTCCTGAAAA GTTCGCTACG
CAAACAGCAC TTGGAAAAAT AGAACAGATG CAAAAGTTGC AGGATAAAGC AGAAAAAGCG
GAATGGACAC CTGAAGATGA GATTGAATGG TTGATTCAGA CTCAGGGCAA AAAGGATCCG
AACAAAGAAA TGCAGGAGGT GCCCCAGATC GATGTTGATT CTTTGGCAGG GGAAATGGGC
CTTGACCTCG TAGAGCTTTC CAAAAAGATG GTTATTTGCA AGCGCTGTCA CGGTCTGCAA
AACTTTGGAA AAGTGCAAGA TTCCCTCCGA CCTGGGTGGA CGAAGGAGCC ACTGTTGTCG
CAGGAGAAAT TTCGTGAATT GTTAAGGCCA ATCAAGGAAA AGCCGGCAGT TATCGTTGCA
TTGGTCGATC TTTTTGATTT TTCGGGGTCT GTGCTCCCTG AGCTTGATGA AATCGCTGGT
GAAAACCCTG TAATTCTTGC GGCCAACAAG GCGGATCTTC TTCCAAGTGA AATGGGACGC
GTGCGAGCTG AGAGTTGGGT TCGACGCGAG CTCGAATACC TTGGAGTCAA GTCGTTGGCC
GGTATGAGAG GAGCAGTTCG GCTTGTCAGC TGCAAGACTG GAGCTGGGAT TAATGATTTG
CTGGAGAAAG CAAGAGGATT AGCCGAGGAA ATCGACGGCG ACATATACGT CGTCGGGGCT
GCAAATGCAG GAAAAAGTAC GCTTTTGAAT TTTGTTCTAG GTCAGGACAA GGTGAACAGA
TCACCCGGAA AAGCACGAGC AGGCAACAGG AATGCCTTCA AGGGCGCGGT GACGACAAGT
CCACTGCCAG GCACAACGCT TAAGTTCATC AAAGTCGATT TAGGCGGCGG TCGAAGTCTA
TATGACACTC CTGGTCTTCT GGTATTAGGC ACTGTGACAC AGTTACTGAC CCCCGAAGAG
CTGAAGATAG TTGTTCCCAA AAAGTATGTC AAACCGATCA AACTGATATT CGATTCACAG
TCAATAATGT TCAAACTAAC ACCTCGTTCC TCAAACAGGC CAATTGAACC TGTCACCCTC
CGGCTCTCTA CCGGAAAGTG CGTTCTAGTT GGAGGATTGG CCCGCATCGA GTTAATCGGC
GACTCAAGAC CCTTTATGTT CACATTTTTT GTTGCTAATG AGATCAAGCT CCACCCTACT
GACATAGAGA GAGCCGATGA GTTCGTTCTA AAGCACGCTG GTGGCATGTT GACTCCACCG
CTAGCACCCG GACCAAAACG TATGGAAGAG ATTGGAGAAT TTGAAGATCA CATCGTGGAT
ATCCAGGGTG CTGGCTGGAA AGAAGCTGCT GCTGATATCA GTCTTACCGG ACTAGGATGG
GTGGCCGTTA CAGGAGCAGG GACAGCGCAA GTAAAAATAA GTGTTCCGAA AGGTATTGGT
GTATCGGTGC GGCCTCCGCT TATGCCTTTC GATATCTGGA AAGTTGCATC GAAGTATACC
GGAAGTCGAG CTGTAAGAAA GTCATCCAAA CTGGCGAATG GGAAACGAAG AAAAGGTGTA
GGGCGTAATT AGTCTTGTTA GTCGTTAGAC TTTATTTTAA TTTGACTACT GTTAACAGGT
AAATTATAAC TTTTCTCTTT CAGTTGATAT CTAG
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| Protein sequence | MRTNFALSTR CFASSSDNHD EEEQRDSPKQ RSKRSQTNRS KKFKIAESID QSKIDKLAQA
FDELARKEGF DSSTARFADD VTFEDKFDDD SFLDDDDDNN KDKVGNLHLD ASMFSLSDFI
DKSEEDGGNP TDQDDEDYLD FGADIDMSIE ARIAAAKRDM DLGRVSAPPD MRSSRREVTA
ADLRKLGFRT EANPFGNDET PRKERFQLVT NSMSCSACGS DFQCHNEDRP GYLPPEKFAT
QTALGKIEQM QKLQDKAEKA EWTPEDEIEW LIQTQGKKDP NKEMQEVPQI DVDSLAGEMG
LDLVELSKKM VICKRCHGLQ NFGKVQDSLR PGWTKEPLLS QEKFRELLRP IKEKPAVIVA
LVDLFDFSGS VLPELDEIAG ENPVILAANK ADLLPSEMGR VRAESWVRRE LEYLGVKSLA
GMRGAVRLVS CKTGAGINDL LEKARGLAEE IDGDIYVVGA ANAGKSTLLN FVLGQDKVNR
SPGKARAGNR NAFKGAVTTS PLPGTTLKFI KVDLGGGRSL YDTPGLLVLG TVTQLLTPEE
LKIVVPKKPI EPVTLRLSTG KCVLVGGLAR IELIGDSRPF MFTFFVANEI KLHPTDIERA
DEFVLKHAGG MLTPPLAPGP KRMEEIGEFE DHIVDIQGAG WKEAAADISL TGLGWVAVTG
AGTAQVKISV PKGIGVSVRP PLMPFDIWKV ASKYTGSRAV NYNFSLSVDI
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