Gene PHATRDRAFT_30282 details

Gene Information

• Locus tag: PHATRDRAFT_30282
• ID: 7195761
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011690
• Strand: -
• Start bp: 28989
• End bp: 31420
• Gene Length: 2432 bp
• Protein Length: 341 aa
• GC content: 46%
• Product: predicted protein
• Protein accession: XP_002184171
• Protein GI: 219127915

Plasmid Coverage information

• Num covering plasmid clones: 4
• Plasmid unclonability p-value: 0.000558466
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CAACTCGTTC AATTTCTGGA TTATGAAAAT GAGCACGACA ACCCAGTCGA GGACAAATAT 
CGGACTCTGG CACATGATCT TTTGCGTGGT CTAGTCGATC CTGCGCTAAA GCCAGATCGA 
GAACAACGGC ATCGTTTGGC TGCAATCATT GATTCACCGT CTCATCATCC CACACGGGAA 
GAGAAAGATC TTTTGTGGAG ATTTCGCTTT AGCTTGGTTG ACAATAGGAG AGCGTTAACA 
AAATTTCTTG TTGCTGTCGA TTGGTCTGTT GATAGCGAGG TTGTTCAAGC AGCGGAGCTC 
CTAGAACAAT GGCGTAAACG GAGTCCTATC GAAGTTACTG ACGCTTTGAA GCTACTGGGA 
AAGCATGTTG CCTTCCAAAC TAACCTTGTT CGCTCGTATG CAATCGATAC TCTGCAGTCC 
GCACCGGACA CTGAGCTTCG TCTCTATCTC CTTCAGCTTG TACAAGCCCT CAAATATGAA 
AATATAGAGG CTTTGGAAAA TGGCACTCCA GCGAGACTCG GAAAATTGAG CAACATCTCC 
TCAAAACAAA CCCAGGTATC ATCGCTCGCG ACCTTCTTAA TTGATCGGGC GTCCAAGAAC 
ATTGAACTAG CGAACTTCTT GTATTGGTAT CTGAAAGTCG AACTCGAAAA TCCCACACAC 
GGTTCCCGAT ATCGAGATGT ATTCGAAGCA TTGAAGGTCC AGCTATCTGA TACACCGTTC 
GTGGTTTCTG GGAGGAATGA CAATAAAAAT AGTGGTCAAA CCTCAGCGAC TCCGTTCAAA 
TCGATTGTGT CTTCTGTCTC GAAGCTAAGT TCAACGTTTC GAGCAAGCGA CGGTCAATCT 
ACTGAGCGTG ATCGATCTAA GGCTGGTGGA CGGAACCAAC GGACTATATG GGAGGTTTTA 
GTGGCTCAAG ACGAATACAT ATCAGGTATC ATGGATATTC AGCTCCGGTG TCGGGATTCG 
CGAGGGAAGA AGGACCAAAA GGAAGCGCTT TTGCAGACGT TGCTATCAAA AGAGGGCTAC 
GACAAGAAAG TTAACCGTGA ACCAGTTCCG TTGCCTTCAG CTCCCGACGT TCTTGTCTAT 
GGAGTTGCGC ACGACACGGT TAAAATGTTC AAGTCTGCTC TATATCCAGC CCTTGTCGAG 
TTTCGTGTCG AAGGAAGCAA TAATTCAAAA TCTGTAGAGA AATGGGGACA TGCTCCGATT 
AGTCCAAAGC AGGCAGAATA TTCAACGAGC TACCAGGTAA TTGTCAAGAC TGGCGATGAT 
CTACGGCAAG ACCAGCTGAT AATCATGATG ATCCAGCTGA TGGACGGTCT TCTGAAGCGA 
GCTGCTCTGG ACTTGTGCTT AATGCCATAT TCAGTCATTG CGATCTCTCG GTCGTCAGGC 
TTGCTAGAGT TTGTGGATGG ATCTTTGCCT ATTTCTCAAG TGCTGTCGAC CCATAGTGGG 
TCTGTGCTCC AATTTTTCCA GTCGGCATCG CCGCAAAGCA ATGCAAAGTA CGACATTAAG 
CCAGAGGTTC TGTCGACTTA CATTCGCAGT TGCGCAGGTT ATTGCGTCAT TACATTCCTC 
TTGGGGATTG GAGATCGCCA TTTAGACAAT ATCCTGTTAC GGCAGACTGG CCACTTGTTT 
CACATTGATT TTGGCTTCGC GTTCGGGCGT GGTAAGTTTT GTCCACAGGT AAAGCCAAAC 
ACTTGTTTCT TTTTCATTAT TTCTTACTGC AACACATGTT TGCTTTCGGT AGATCCCAAA 
CCACTTCCGC CAGTTTTCCG ACTAACACGG GAGGTAAATG GCGACTTGTC ATTGTGTGCA 
GGTGAAAACA AATCTTTTGA ATCATGCTTA GTTTTTTGTC TCTTTTTCAC GTAGATGGTT 
GATGGTATGG GGGGTATAGA TTCGAGTGAA TATCGTCAAT TCTGTTCGTT GGCTTGCCAA 
GCATACAATG CTCTGCGCAA GAGTGCGGGA TTGGTACTTA ATCTACTGAG CTTAATGAGT 
GACGCTGGTA TTGAAGATCT GTCGAATAAT CCAATGGCCG ACGCGGATGG TGTCATTGCA 
AAGGTTGAAG AACGATTTAT GTTGCACTTA TCGGACGACG AGGCCGAAAG TTACTTTCTC 
GGTTTGATCA ACGACTGTTT GACTGCTATT GCACCGCGTG TCATGGATGT CTTCCATTCA 
TTTGCTGTTG CGAGGAGATA GTACAGAGAT TGGAGAAATG GATGGAATGA ACAATACGAG 
GTCGCCCAAA GTATGTTTGG TACTTCTCGA CTCGTTGACA AGGAACTGGC CGAATCGTGA 
TCAAGTCCTC TGATGAAGCT GTGGCGCACT TCTTCGGCTC GAAGAAATCA TGTGTGGATG 
ACGCAGAAGA AAGATGGAGG TAATATATGA GTGGCTGTCT ATATAGGCAT TGTCCTAGTA 
AGTTCTGTAT AACTTTGTTT TCTAGTAAGC TT 

 

Protein sequence

MDIQLRCRDS RGKKDQKEAL LQTLLSKEGY DKKVNREPVP LPSAPDVLVY GVAHDTVKMF 
KSALYPALVE FRQAEYSTSY QVIVKTGDDL RQDQLIIMMI QLMDGLLKRA ALDLCLMPYS 
VIAISRSSGL LEFVDGSLPI SQVLSTHSGS VLQFFQSASP QSNAKYDIKP EVLSTYIRSC 
AGYCVITFLL GIGDRHLDNI LLRQTGHLFH IDFGFAFGRD PKPLPPVFRL TREMVDGMGG 
IDSSEYRQFC SLACQAYNAL RKSAGLVLNL LSLMSDAGIE DLSNNPMADA DGVIAKVEER 
FMLHLSDDEA ESYFLGLIND CLTAIAPRVM DVFHSFAVAR R