| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_23306 |
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| Symbol | |
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| ID | 7195748 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011690 |
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| Strand | + |
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| Start bp | 547167 |
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| End bp | 550091 |
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| Gene Length | 2925 bp |
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| Protein Length | 908 aa |
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| Translation table | |
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| GC content | 49% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002184157 |
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| Protein GI | 219127886 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.103886 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGCGATA TTGCCAGCGC TCCTTCCCTA TACAGTCGCC CCGCATTTTT CAGACAAACC
CGGACCGGAA AGATTCTCAA AACCGTCAAC GAGCGATATT ATCGAGACGA TTTGGGCTTT
GGCTGTCACT TTGTCGATGA TGCAAGTGTC AAGCGACATA AACAGGTTGA CGAGGTTGTA
GGAAAACCCG AAACGATAGA ATCAGCATCA GAATTGCTCG CATTGCTTCA GCCCTGTCAA
CCCCATGCGT TAATAGTCTG TGATGCCAAT GTTTTGTTGC ACAATATAGA TGTTTTGGAA
CAAGCGGACT CTCTCATGCC GAATATTGTC ATTCCTCAGA CGGCTTTAAT GGAATGTCGG
GCCAATCGAA TGGTAGCTTA TGACCGCACG GTCGAGCTGT TGCGAGCAGT AGGGGGCGGG
AAGACCAAAA CTACCAAACG TTGCGGCATC TTCTTTGCTG ATCCGCATCA TGCTGCAACT
CAGCTCGAAC ATGATGAGAC CAAAATTGAG CGCAAGGGAA ATTCCATCAA CGATGAAAAC
GATGCCCGCA TTCGAAAAGT AGCCGACTAT TTTGGCACAG CCTTAAAGAA CACGGGTGTG
CGAGTGATCT TGCTGACCGA CGACGCCGGC TCTCGCACAC TCGCGGCAGA AGAATCCTCA
ACGTACCAAG CCAAGTCGGT GCGAGAATGG GTAAAAGAAT TAGAAAGGTT CAATCCAGGT
CTATCTCTAC TCGATCAAGT CGCACAATTT AATAATACTA GCCCCACGGG TGGTATCAAC
GAAAAGGATT ACTTTGAAGC TCATCTAGAA GCCAAGCTTT TGTTACGAGG AGTACAAGCT
GGAATGTACC ACCGGGGAGT GCTACGATCC GCAGGAAGCC ATTCCGCTAT GATTACGATT
AGACAAGGCG ATGAACGAGT AGCTGTGACG ATACCAAGCT TTACGGATCG GAATCGTGCC
GTCGACGGCG ATGTCGTTGC TGTGGCTTTG CATCCTTTGG ACAAGTGGAT TACTGCGAGC
GTCGATCTCA AAGCCAGTAA GGCTGAGGCA AACAGAGCTA TTGCGCCAGG TATCGCTAAT
GAAACAGCTG AACCAACTAT AAGTGAAATG AACAATGTCG CCGACACCTT TGCTTTGGAG
GATGACGCTG AATCACTGCG TCCCACTGGT AAGGTTGTTG GAATCATTCG GCGCAACTTT
TCCACTTACA GCGGCTCCAT TTACGCCATC AAAAGTGACT CTACAGAGCT GACGGATCGA
GAGCGGACTG CATCAGATTA TGAACGCGAG CATCCGGATG GGTCAATCAC CTGCGTATTC
TTTCCCGTCG ACAAGAAGAT TCCTCCCATT TTAATTCGGA CAACGCAACG GGATCGCCTT
TTCGGTCAAC GCATAGTTGT GGCTATGGAT TCCTGGCCCT CCACATCTAT TTACCCCCTA
GGACATTACG TACGGGTGAT TGGGCCAGCC GGATCTAAAG ACGTTGAAAC CGAAGTGCTG
CTTCAAGAGC ATGACATACC TCACGAACCT TTCCCTGCTG CTGTTCTTGC TTGCTTGCCA
CCTGAAGATT ACCGCATCGA TGTAGACAAT AGCCCCGGAC GCCAGGATAT CCGGCACATT
CCTGTTTTGT CAATCGATCC GCCCAATTGC AAAGATATCG ACGACGCACT ACACTGCACT
GTGCTACCCA ACGGAAACTT TCAGGTTGGT GTGCACATTG CGGACGGTAC GTTAGGGAGA
AGGATTGTCT ACAGTTAGCC CCTATGTTCG ATCTGACAAC ACACTATGGA TTCTTTTGCA
GTGACACACT ACGTCCAGGC AGGTACCGCG ATTGATCTAG AAGCAGCGAA TCGTTCGACG
TCGACGTATT TAGTAAATAA GCGACTCGAC ATGCTTCCCA GCCTCTTAAC AACAGACCTT
TGCAGTCTGA AAGGAAATGT AGATCGGTAC GCCTTTTCGG TACTGTGGGA GGTCACACCA
GAGGCCGAGA TTCTCAACGT TGAATTTCAA AAGACCATCA TCCACTCGAT TGCCGCCCTT
ACTTATCAGC AAGCGCAGAC AATGATTGAC CAACCCGACG ACCCGAACGA TATTCAGTCG
AATGCCGTGA AGCGCCTCGC ATCTCTTGCA CGTAAGTTTC GAAAACGTCG AATTGATGCT
GGGGCGTTGA CTTTGGCATC ACCAGAAGTT AAGTTCGTGT TGGACAGCGA GTCCTTGAAT
CCAACAGACG TCCAAGCGTA CGCACTGTTG GAAGCAAATG CTGTCGTAGA GGAATTCATG
CTACTGGCCA ACGTTACCGT ATCGAAAAAA ATTCTTCGGC ACTTTCCGAC TTTGTCAGTA
CTTCGACGGC ATCCTGCTCC TAACCGCGCT ATGTTTGATA GCCTTATCAG TAAAGCAAAG
AGCAAGGATT TGGATATCAA TATCGACGAC TCGAAGCGTC TAGCGGATTC GCTGGATGCC
GCTGTTGTAG AGTCTGACCC TTACGTGAAC AAACTTCTTC GTATTTTGTC GACCCGATGC
ATGAGCCCCG CGCAGTACTT TTGCTCGGGA GAGTTTCGCC CAATGGAGTG GCATCACTAC
GGTTTGGCGG CGCCTGTCTA TACACACTTT ACGTCCCCAA TTCGACGTTA CGCGGATGTT
TGCGTCCATC GATTGTTAGC TGCTGCTGTA GGGGTGGCCC CTTTACCACC TCACCTCTCA
TCGAAATCTT ACCTGCATGA TCTATGTGCC AACATGAATA GACGCCATCG TGCGGCGCAG
CTTGCAGGTC GAGCCAGTGT GCAGCTTCAT ACACTCATTT TCTTTGCCGG TGATGGGGCC
AAAGAAGAAC AAGCTTACAT ATTGGACGTA GAAACTGCAG AAGGAGTCGA GCCTTCCTTT
ACTGTGATTG TTCCTAGATA CGGAATCGAA GGGAGAGTGA AGCTA
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| Protein sequence | MGDIASAPSL YSRPAFFRQT RTGKILKTVN ERYYRDDLGF GCHFVDDASP CQPHALIVCD
ANVLLHNIDV LEQADSLMPN IVIPQTALME CRANRMVAYD RTVELLRAVG GGKTKTTKRC
GIFFADPHHA ATQLEHDETK IERKGNSIND ENDARIRKVA DYFGTALKNT GVRVILLTDD
AGSRTLAAEE SSTYQAKSVR EWVKELERFN PGLSLLDQVA QFNNTSPTGG INEKDYFEAH
LEAKLLLRGV QAGMYHRGVL RSAGSHSAMI TIRQGDERVA VTIPSFTDRN RAVDGDVVAV
ALHPLDKWIT ASVDLKASKA EANRAIAPGI ANETAEPTIS EMNNVADTFA LEDDAESLRP
TGKVVGIIRR NFSTYSGSIY AIKNYEREHP DGSITCVFFP VDKKIPPILI RTTQRDRLFG
QRIVVAMDSW PSTSIYPLGH YVRVIGPAGS KDVETEVLLQ EHDIPHEPFP AAVLACLPPE
DYRIDVDNSP GRQDIRHIPV LSIDPPNCKD IDDALHCTVL PNGNFQVGVH IADVTHYVQA
GTAIDLEAAN RSTSTYLVNK RLDMLPSLLT TDLCSLKGNV DRYAFSVLWE VTPEAEILNV
EFQKTIIHSI AALTYQQAQT MIDQPDDPND IQSNAVKRLA SLARKFRKRR IDAGALTLAS
PEVKFVLDSE SLNPTDVQAY ALLEANAVVE EFMLLANVTV SKKILRHFPT LSVLRRHPAP
NRAMFDSLIS KAKSKDLDIN IDDSKRLADS LDAAVVESDP YVNKLLRILS TRCMSPAQYF
CSGEFRPMEW HHYGLAAPVY THFTSPIRRY ADVCVHRLLA AAVGVAPLPP HLSSKSYLHD
LCANMNRRHR AAQLAGRASV QLHTLIFFAG DGAKEEQAYI LDVETAEGVE PSFTVIVPRY
GIEGRVKL
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