Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_23203 |
Symbol | |
ID | 7195900 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011690 |
Strand | + |
Start bp | 172501 |
End bp | 173402 |
Gene Length | 902 bp |
Protein Length | 187 aa |
Translation table | |
GC content | 47% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002184073 |
Protein GI | 219127710 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.366446 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | AGAGTGAATG CACTTTGGTT GCCATATTGA GGTTGATATC AAGGTTTCCT GTTTGCACTC GTACGTTTTC CATGTCGGTC ACCATTCACA CCACCGCCGG CGACCTCAAA CTGGAAATTT TTTGCGATAC GGCGCCTCGG ACATCCTTCA ACTTTTTGGC ATTGTGCTCT TCGGGTGCGT ACGACGGAAC GATATTTCAT CGCAATATCA AAGGGTTCAT GATCCAAGGT ACGCTCTCAT ACAAATGATT TGACGACAGA AACATGAAAT CTTCAGTGCC TATCTTTCGC TTCTTTTAAT GTGTTTTATT GTTCTTAAAC AGGCGGCGAC ACAGCAGACA AGACGGGCAG CAAGGGAGGG GAATCGATTT GGGGGCCAAT TCCATTTCGG GACGAATTCC ATCCCGACAA CGTACATGAT AGGCGTGGAG TACTAAGTAT GGCGAATAAG GGACCGAATA CGAATAGTGA GTTCAACTGA AACGACTCGG ATCGTGTGAG CGATTGCACC CTAGCTCCAT CGATATGGTT TAGAACAAAG ATCGTGTTGC GCTAACACTT GTATATGCTC GCTTATTTTA TGCTTCAGGA TCTCAGTTTT TTGTGTTATA CGAGCGGCAG CCGCATTTGA ATAATTCGCA CACAGTCTTT GGTCGCTTGC TGGACGGATG GGACGTTTTG GATAAGATGG AGCGAATGCC GGTGATGGGA TCTGCGGCTC CGAAAAAGCG ACTCCAACAG TGTCCCATAG ATCCTCCCAA AATCACCAAG ATAACGGTAC ACGCAAACCC GCTGGCCGAC GAAATGATCG TGTATCCTAC TCCCGAGGGG GCTCCCGAGA AGCGTTTATA AAAGTGGGAA AATTCAAGGA TATTCATGGC TAGAGCACTA ATGCTCGTTA TG
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Protein sequence | MSVTIHTTAG DLKLEIFCDT APRTSFNFLA LCSSGAYDGT IFHRNIKGFM IQGGDTADKT GSKGGESIWG PIPFRDEFHP DNVHDRRGVL SMANKGPNTN RSQFFVLYER QPHLNNSHTV FGRLLDGWDV LDKMERMPVM GSAAPKKRLQ QCPIDPPKIT KITVHANPLA DEMIVYPTPE GAPEKRL
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