Gene PHATRDRAFT_23203 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_23203 
Symbol 
ID7195900 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011690 
Strand
Start bp172501 
End bp173402 
Gene Length902 bp 
Protein Length187 aa 
Translation table 
GC content47% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002184073 
Protein GI219127710 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.366446 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
AGAGTGAATG CACTTTGGTT GCCATATTGA GGTTGATATC AAGGTTTCCT GTTTGCACTC 
GTACGTTTTC CATGTCGGTC ACCATTCACA CCACCGCCGG CGACCTCAAA CTGGAAATTT
TTTGCGATAC GGCGCCTCGG ACATCCTTCA ACTTTTTGGC ATTGTGCTCT TCGGGTGCGT
ACGACGGAAC GATATTTCAT CGCAATATCA AAGGGTTCAT GATCCAAGGT ACGCTCTCAT
ACAAATGATT TGACGACAGA AACATGAAAT CTTCAGTGCC TATCTTTCGC TTCTTTTAAT
GTGTTTTATT GTTCTTAAAC AGGCGGCGAC ACAGCAGACA AGACGGGCAG CAAGGGAGGG
GAATCGATTT GGGGGCCAAT TCCATTTCGG GACGAATTCC ATCCCGACAA CGTACATGAT
AGGCGTGGAG TACTAAGTAT GGCGAATAAG GGACCGAATA CGAATAGTGA GTTCAACTGA
AACGACTCGG ATCGTGTGAG CGATTGCACC CTAGCTCCAT CGATATGGTT TAGAACAAAG
ATCGTGTTGC GCTAACACTT GTATATGCTC GCTTATTTTA TGCTTCAGGA TCTCAGTTTT
TTGTGTTATA CGAGCGGCAG CCGCATTTGA ATAATTCGCA CACAGTCTTT GGTCGCTTGC
TGGACGGATG GGACGTTTTG GATAAGATGG AGCGAATGCC GGTGATGGGA TCTGCGGCTC
CGAAAAAGCG ACTCCAACAG TGTCCCATAG ATCCTCCCAA AATCACCAAG ATAACGGTAC
ACGCAAACCC GCTGGCCGAC GAAATGATCG TGTATCCTAC TCCCGAGGGG GCTCCCGAGA
AGCGTTTATA AAAGTGGGAA AATTCAAGGA TATTCATGGC TAGAGCACTA ATGCTCGTTA
TG
 
Protein sequence
MSVTIHTTAG DLKLEIFCDT APRTSFNFLA LCSSGAYDGT IFHRNIKGFM IQGGDTADKT 
GSKGGESIWG PIPFRDEFHP DNVHDRRGVL SMANKGPNTN RSQFFVLYER QPHLNNSHTV
FGRLLDGWDV LDKMERMPVM GSAAPKKRLQ QCPIDPPKIT KITVHANPLA DEMIVYPTPE
GAPEKRL