Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_52539 |
Symbol | SDH2 |
ID | 7195465 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011689 |
Strand | - |
Start bp | 478379 |
End bp | 479392 |
Gene Length | 1014 bp |
Protein Length | 273 aa |
Translation table | |
GC content | 52% |
IMG OID | |
Product | succinate dehydrogenase iron sulfur protein |
Protein accession | XP_002184001 |
Protein GI | 219127560 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.885899 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTTATCTA GTTCTTCCAC CCGCACCACC AAGACGCTGG TACGTTTTTG TGCACCTAGA GATGCATGAT GAGTTCCGGT AAACACTGGA AACGAGGCCG TAGAAGCGAT GAGAAGACGG CACATTTAGA AGTGCCGATT GCCGTGCTGT TCGTCCTCGA GTGGCAGCCG TGAGCTTCGT CAATCGCTTA CGCATGTCTA TGCACTTCTT AACTCACTTG TTTTTCTCTA GTTCTCGCGC TTCGCGGCTC GTTCCTTCGC GACCGCGGAC CTGAAAGCCA ACGCCATTCC CAAACAGGCC CCGCGCATCA AGTATTTCAA GGTGTACCGC TGGGATCCGG AGCAGTCCCA AAAACCCTAC CTCTCAACGT ATCCGGTCGA TTTGGCAAAC TGTGGTCCCA TGGTGCTGGA CGCTTTGATT AAAATCAAGA ATGAACAAGA TCCGACGCTG ACTTTTCGGC GATCGTGTCG CGAAGGAATT TGCGGATCGT GCGCCATGAA CATTGACGGC GTCAACACGC TCGCCTGTCT ATCCTACATT GATCAAAAGG ACACTTCGAG TGCGACCAAG ATTTATCCAT TGCCGCACAT GTATGTCATC AAGGACTTGG TTCCGGACAT GGGTAATTTT TACGAACAGT ACCGTTCCAT TGAACCCTGG CTGCAACCGG AAAAGGGCAA GGAACCGGGC CAGGCCGAGT ACTTGCAAAC CCGCGAAGAT CGTGCCAAGC TCGACGGAAT GTATGAGTGC ATCCTGTGCG CATGCTGCTC GACGGCATGC CCCTCTTACT GGTGGAATGC CGATAAATAT CTCGGACCGG CCGTGTTGCT GCAAGCCTAC CGGTGGATTG AGGATTCGCG TGACGGTTCC ACCAAGAAGC GTCTGGAGGA ACTCGACGAT GCGTTTAAGC TCTACCGCTG TCACACAATC ATGAACTGTA CTAAAGTATG TCCTAAGCAC TTGAATCCGG GCAAGGCGAT CGCGCAGATA AAGAAACGGT TGGCGGATCA CTAG
|
Protein sequence | MLSSSSTRTT KTLFSRFAAR SFATADLKAN AIPKQAPRIK YFKVYRWDPE QSQKPYLSTY PVDLANCGPM VLDALIKIKN EQDPTLTFRR SCREGICGSC AMNIDGVNTL ACLSYIDQKD TSSATKIYPL PHMYVIKDLV PDMGNFYEQY RSIEPWLQPE KGKEPGQAEY LQTREDRAKL DGMYECILCA CCSTACPSYW WNADKYLGPA VLLQAYRWIE DSRDGSTKKR LEELDDAFKL YRCHTIMNCT KVCPKHLNPG KAIAQIKKRL ADH
|
| |