| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_49270 |
|---|
| Symbol | |
|---|
| ID | 7195562 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011689 |
|---|
| Strand | + |
|---|
| Start bp | 429703 |
|---|
| End bp | 431038 |
|---|
| Gene Length | 1336 bp |
|---|
| Protein Length | 154 aa |
|---|
| Translation table | |
|---|
| GC content | 49% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002183870 |
|---|
| Protein GI | 219127288 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TGAAGCTCTT CCGTTTCACT ATCGCAAAAT TCAGCTTTCC ATCGATATAT CTCTTTCTGT
TTGCGTCAGC GTCTCACGTA TCTGCTTTCT CCCAAGCGCA CAATTCCGAT ACCCACGCAC
ACCCAAACAA GAGAAAAGAC ATGCCCACTC CTCTCTGGTT CCAACACGAA ATCACCGTCA
CGGCTCCGTC CCGCGGTTGC CACCTGATTA CCCGAGATAT CCAAAAGGCG CTTCAGGATG
ATTTGCCAAA AGTTCACATA GGGATGTGCA ACGTATTTGT CCAGCACACG TCGGCGTCTC
TGACCATCAA TGAAAACGCC GACCCGGACG TCAGAGGAGA TATGGAAACG GCTCTCAACA
AAATTGTCCC GGCCCAGTGG AATCGAGACG GGACCTTCAA ACACACCCTA GAAGGTGACG
ATGATATGCC TGGTCATGTC AAAAGTAGGT GCGTTGCCGT GGTATCATAG CGTGGATGTT
TCTTTGTTTG GTTTACGTAG AAACCGGTTT TTTCAAATTC CTCTTGCTCA CTGTCTTACT
ATGGACGGCG TATGCAGCTT GATGGGTGCG AGTTTAAATA TTCCCGTCAA GTCGGGTCGA
CTGGCGCTGG GCACTTGGCA AGGTATTTAT TTGAACGAAC ATCGCGATCA GGGTGGATGG
GGTGGTGGAC ATCAACGCAG CGTTATTATT ACAGTTCAAG GACAAGGGAA ATGAGAGGGA
CAAAAGAGTT TGTCTAATAT TACTATTCTC CATAAAATGG CCTTGCAATA TGCAATTGTT
AAATCATGTT GTGGCTATTA CTATTCGTGT CGGTGTCGGT GTCGCTCTCT TCAATCCCCT
TCGTCGACGC ACGACGTTTC CTGACCGCCA CGAAAACTAC CAATAGTGTA AGTGCAAACA
CCCCTCCAAC AGATCCGCCA ACAATTTTCT GTCGATTCCT GCCATCGTCA CTTCCACCAC
CGGCACTGTT TCTCTCGTCG GCAATACCAT TGATAAGAGT ACCATCTCCA CGATTTTCAT
TATGTTCTTC GGGGAGCGTA TCACAAAGAC GGCAATCAAT CTGATAGTCC CGTTGTAAAA
CCAAACGTGG AATCCAGGTA CTGTCATCGT CACAGGCTTC CTTAATGACG GCGCAATGCA
AAGCGTTGTC ATTGTTACCC TTACAGGCAC CTGTTTCGAC AAAGTCACAT GTGCAATCGC
CATTCTTTCT GGAGCGGCCT TCAAACGCAG TCAGAAAATT TGAAGCCGTT TCCGATCCGG
AGATTTGGCC ATTGGGTGTA AGGGGACACT CCGCTGCATC CCAGACGCAT GCGCTATTCC
CGCTTCTCCA CTCACA
|
|---|
| Protein sequence | MPTPLWFQHE ITVTAPSRGC HLITRDIQKA LQDDLPKVHI GMCNVFVQHT SASLTINENA
DPDVRGDMET ALNKIVPAQW NRDGTFKHTL EGDDDMPGHV KSSLMGASLN IPVKSGRLAL
GTWQGIYLNE HRDQGGWGGG HQRSVIITVQ GQGK
|
|---|
| |