| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_49148 |
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| Symbol | |
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| ID | 7195615 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011689 |
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| Strand | + |
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| Start bp | 65744 |
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| End bp | 70277 |
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| Gene Length | 4534 bp |
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| Protein Length | 1057 aa |
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| Translation table | |
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| GC content | 48% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002183803 |
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| Protein GI | 219127148 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.22092 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACGCC TTGTAACGGG AGCACTTGTA TTTGGTATTG TGTTTCTGGT GGTACTAAAC
GACAGTATCA CCAACAAAGC GCGGTCGGAA GCCTTACGAC GACAGTCGCC ATTTCCGCAG
TGGAACGAAC AACTGCTGCA CGATCAAGCC AAGCCACAGA GAACGGTCCA CTTTCCTTTC
CGCGACGGAT GCCCGCACGA CTGTCACGAA TATCGCCGGG ACGGTGCTCT CATGACCGAT
GAGTATTACC GCGTAAACTT GGAATGGTAC TTGGGGGAAC CTGAGCAGTA CAATCCCCGT
ACAGACTGGA AACTTCAAAA GAATTCTTCC TCTTACAGCA TGGGACTCAA TTTCCAGTGC
CCCGAATCGT TTGTACGTAC CTTTCAAAAG GCATCCCGCG AATTGGGCGA GAAGGCAACA
AAGCAACTGT CAACACCAGA CCGAACTATT TCGATCCATC CTCCGAAACG TATGCAGCTC
GCCCTGACCT ACCTCTGTTG TTTGGATAGC GAGGAGGCCA GTGAAGCCAT TGCTGCTATG
GATGAGTGGC TTACCCAACG GGATTTGTTT GACCTTGAAG TGCGATTTGA CGAAATCCAA
AGCTGGCACG AGGCTCCGAA TGCAGTTGCG ACCGTTCTAG TTGCCGACCA AGCTTCGCAG
CAAGCTCTCA TGCGACTCAA TCATGAATTG AGCCGTCATT TGCAGCGCTC CGATATTCCC
GTTGCTGTAC CACGTGAAGA CCAAATGCCA TTTCATGTCG CGTTGGCTGG GTTTCGCCAC
GGAGGCCGCG CTGAATCGTA CGACCCATCT CTTGACATTA CGTCCCAACT TCCCACTGTC
TACAAGCTTG TACAGAAGGT TTCGGACAAG TACAAGGACG TTTGGACCAA AGCTGACCGT
AAAGGGAAGG GTGAAGACAT GCTTCGTATC CAGCACAATC CTCGACACTC TCCTCGCCCT
ATTTTACACA CTTTCCCATT GATCGATAAG GAGACTTGGT AGGGGCAGTC GTGCTTGTTC
ACGAATTCTA TTTTCGGAGA ATGTATTTAC AGTATATTTC TTTTCCTTTG TCTTTGCATG
TGGCTAGCAA ATATTTCAAC AAGAAATATG TACGAAATTT CACCAGGTTG CTGACGATAG
CCATGCGTTC TGAGTGGACT GACTAAAGCT AGCAACAATA TCAAACAAAA AGCCAGTCCT
CTCTGATTGT GATATTAAGG TTTTACAATC GAAGATGTTT TGGTTGGAGA GGTACAGTAA
TATATGACGA CTCTGGAGGT CTGATAAGCT GATAGGTGAT ACTGTCTATA CTTATTACAG
TCTATGTTTC GAAGGTTCGC ATGGCTTATT CCACATTTAT TAACGTAAGT TGTTCACTGT
CAGATCTTCC ACACTTTCAC TGTCGCATAG GGACTTGTCT CAGTTTCTGT GACAGGATGA
TGGTCAATAG GTCGACCGAG AGGGGAAACG CAACAATGAA CCGAGCAATG AAATGGTGCA
CGATCAAGAT ACTGATTTAC CGTTGGCATC CAGCCTTAAG AGTATACTTC AAACCAGCAC
AAATTCATTA TGGTGAAGAT GTATTCTAGT AGTGAAAGAA ATCACACTAT TTGTCGTCAT
TTGTTCCGAA AAGTGTGTTT TCGAACTCAA TTAACAGTAA AGCGCTTGTT TGGTATCTTG
ACGATTGCCA CAGCGTTTAT AATCATTCAG CAGAGACGAG AGAATAGTGC GTTTCCGCAA
TGGAACGAGA AGCTCATTCA TGGTCGCGCC GAGCCACAGC GCACGCTGCA TTTTCCGTTT
CGGACCGGAT GCCCGCACGA TTGCGGTGCT TATCGTCACG TGGAGTCTAG TAGATTCGGC
TCCATTCTCA ACGACGAACA GGACTTTTAC AGAGTTACCG TCGAATGGTA CTTTGGGGAA
CCAGAAAAAT ATATGCCCAC TGTTGATTGG AAAGCTCAAA GGAATTCTTC ATCGTACAAG
CTGGGTATTA ATTTTCAATG CACGGAATCT TTCGTCCGCA CATTCCAAGC CGCATCTCGA
GACCTCCACG ACCAAGCCAC AAAATTTTTG TCGACTCCTA GCCAACCTAC TACGATACAT
CCGCAAAGAC GCATGCACGT TTCACTTTCC TACTTGTGCT GCCTGAATTC TGAAGAAGCG
AAGCGTGCGA TAGCTGCAAT CGACGATTGG ACGGGAAGAG CCAAATTTGA TATGGAATTA
CGGTTCGACG AAATTCAAGC CTGGCACGAA TCTCCGAACT CCGTGACGAC GATCGTGCTG
GTTGATGAAG CTTCGCAGCA AACACTTATG CGAATTAATC ATGACTTAAA CCAGCATCTG
CATCGCTTTG ACATTCCTAT TGCGATCCAA CGTGAGGACC AAATGCCCTT TCACGCTACC
GTTGCTGGGT TCCGGTATGG TTCCAACGGC GAATCCTACG ACCCAACGCT CAACATTGAA
CCACAACTAT CGACCATTTA CAATTTTGTC CATCAAGTTT CGCAGCAGTA CCTGATTGCT
TGGAATGGCC CAAATGGAAA GGGTATCCGC ATTCAGCACA AGCCCAAGCG ATCCAGCCAA
CCAAGTCTCC ACACTTTTCC GCTTGTAGAC AAGGAGAAAA AGTGAGTTGG TGTTTTCCGA
ATGGGAGATG AAGCATGTTT TTTTGCGCCA AATTTCTGAT GTCAAAGGTA CCAGCAGTAC
CGACAGTGCG AGCCCGCTCC CTACTGGATC TCGAACCCAT GAGGATGTTT GCTTTACCAT
CGTAGATTCT TAGGGATCAG CGCGGATTGC CATGGAGGAC AAACCACTTT CTTCTCTTTC
CGGCTGCAAT AAAGGAACAA CTTTCTGCTC TGATTCCGAT TCTATACTGT TGGGCAAACA
CGATATAATG TTGTCCATTA TCCTAGAAAG CTTGCAAAGA AGAAGTGATC CTCATTTGAC
CCCACCCATC CAACCCTTTC TGTAAAGAAG CTTCACGGCT AGCTTTAGCA TTGGAATTCG
TAGAAGTGGA CAATCATGAA ATAATACTGA CGTTGAGTAG AACGAGGATA GGGTCTCATT
CAGGAAATCG GGGGCAGTCC AATGGCAGAT TGTCCTCGCG GCTTTCGAAA CTTTCCTCAC
TTGTTGACTT TACCGCATTT CAGCCCATAA TAATAATAAT CAAACGGATG ATTGTGCCTA
ACAATTGTAC AGTTAATGTT GTTTCGTCTG CGGTCGTCCG TCGATTTGGG TTGCGCTTTT
CCTTTCTTTC ACTGTCGGCT CCAATTCTTT GCGATGTTTG TTTACACACT CCGCAGAAAC
CATGGGAGGA CGCCTTCATG CCGTTCGCTC GTGGCCAAAC GATGGAAGCA AACACTTCTG
GTAGCACGAC CGACGACGTG ATTGATTTCC TCGTTCCGTT GCAGCAGAAC GGGCATCCTT
TTGCTTCCTA TGCTGTACGA ACCGACACGG ATGTCTCGTT CGGTAGAACC GTGGAATTAT
GTATGCGTCT GACCGAAGTT GCATCGTCTC TATCGCCAAA GAACGCGGCT GCTGCAGATA
CTTCGAGCAA GAACGAAGCT TCGACGCTTG CTCGCCGCAC ACTTGGACGC GTAGACTTTT
TACCAGCCTT ATGGGCGGCT TGTGGGTGCA ACACCAGGCC CAACCGCGAT ACGTCAGTGC
CGCAGTCGTA TCACTACAGA ACATCGCAAG ACAAATGTGA TGCTTGTCAG CGAGTTCACC
ATTGGGCTAT GCGTTTTTTG CCTCGTCGTT TCCTTTACTT TGCTCGCTAA ACGATTCGAG
GGACTACGAG TTTGCCGTCA TGCCTGGCAA GAGTGAGCGT TCCTATCCCG GATTGGAATG
TGTCACCATC AACGAAATCC CGTTGAAGAA TTTGCCAAGA TTTCCTAGAC GGGGGTTGGA
GCTAGAAAGC AACAACGAAG ATACCGCGTT GGTAGGTTGG TGGAGGATCA GTGCAGGAGA
CACGCTGTCG CTACTCCCGC CTCCTTCGCT ATTCCACAAG AATGGAATGA TTGAAGTCGA
CGACAACGAG AGTGACAAGG CAGAAAACAA AACGCAGCTT GTATTATTGG AACCCCTTCG
GCTTCAACTC ATGAGAGGAG CTGCCACCGC CGTTTATGAG AACAAAGCTG TAGGCGAACT
ACGGATGCGT GATACACCGA TATCTAAAAC CAATGGACCT AGGCTCTCAT TCACGACGGA
TGGAGCATCG TTAGACCACA CCGTTGTGGA AACGAAAGAG GTTCAGCGGG ACATTGAACA
ATATCAACCA GAGAGACTTC AGAATGATGG CGACTCAAAC GAGAACATAC CACATGCGCT
GGATCTCTCT TGGAGGAAAC CCTCTACAAA GAACGACGTT ACTCAGGAAA GTTTGCGTTC
CGCCTCAAAA AATAGCAGGG CTCACGATGG AAACGACAAA AGGGATCCAA GTCGAATGGA
GGAGGGTTTA CAAGTTTTTT CTTCCGTACC GAAAGGTCCA TCGCATCCGC CAGAGTATTT
GCAACCGATC TCTCGAGCTA CACAGGGAAT TTGA
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| Protein sequence | MKRLVTGALV FGIVFLVVLN DSITNKARSE ALRRQSPFPQ WNEQLLHDQA KPQRTVHFPF
RDGCPHDCHE YRRDGALMTD EYYRVNLEWY LGEPEQYNPR TDWKLQKNSS SYSMGLNFQC
PESFVRTFQK ASRELGEKAT KQLSTPDRTI SIHPPKRMQL ALTYLCCLDS EEASEAIAAM
DEWLTQRDLF DLEVRFDEIQ SWHEAPNAVA TVLVADQASQ QALMRLNHEL SRHLQRSDIP
VAVPREDQMP FHVALAGFRH GGRAESYDPS LDITSQLPTV YKLVQKVSDK YKDVWTKADR
KGKVYVSKVR MAYSTFINVD REGKRNNEPS NEMVHDQDTD LPLASSLKIK RLFGILTIAT
AFIIIQQRRE NSAFPQWNEK LIHGRAEPQR TLHFPFRTGC PHDCGAYRHV ESSRFGSILN
DEQDFYRVTV EWYFGEPEKY MPTVDWKAQR NSSSYKLGIN FQCTESFVRT FQAASRDLHD
QATKFLSTPS QPTTIHPQRR MHVSLSYLCC LNSEEAKRAI AAIDDWTGRA KFDMELRFDE
IQAWHESPNS VTTIVLVDEA SQQTLMRINH DLNQHLHRFD IPIAIQREDQ MPFHATVAGF
RYGSNGESYD PTLNIEPQLS TIYNFVHQVS QHELVFSEWE MKHVFLRQIS DVKVNVVSSA
VVRRFGLRFS FLSLSAPILC DVCLHTPQKP WEDAFMPFAR GQTMEANTSG STTDDVIDFL
VPLQQNGHPF ASYAVRTDTD VSFGRTVELC MRLTEVASSL SPKNAAAADT SSKNEASTLA
RRTLGRVDFL PALWAACGCN TRPNRDTDYE FAVMPGKSER SYPGLECVTI NEIPLKNLPR
FPRRGLELES NNEDTALVGW WRISAGDTLS LLPPPSLFHK NGMIEVDDNE SDKAENKTQL
VLLEPLRLQL MRGAATAVYE NKAVGELRMR DTPISKTNGP RLSFTTDGAS LDHTVVETKE
VQRDIEQYQP ERLQNDGDSN ENIPHALDLS WRKPSTKNDV TQESLRSASK NSRAHDGNDK
RDPSRMEEGL QVFSSVPKGP SHPPEYLQPI SRATQGI
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